Theobroma cacao (cacao): 18613475
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Entry
18613475 CDS
T02994
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18613475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18613475
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
18613475
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
18613475
NCBI-ProteinID:
XP_007050790
UniProt:
A0AB32VMR9
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Position
1:30604159..30607974
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AA seq
587 aa
AA seq
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MQKKMAYSFPDEVLEHVFSFIQSDKDRNAVSMVCKSWYEIERWCRRKIFIGNCYAVSPRI
VIRRFPEIRSVELKGKPHFADFNLVPEGWGGYILPWIVEMAGAYPWLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLSFCEGFSTDGLAAIAASCKNLKELDLRESEVDDLSGHWLSHFP
ETYTSLVSLNISCLGSDEVSFSALERLVGRCPNLRTLQLNRAVPLDKIATILRRAPQLVE
FGTGTYAAELRPDVFSNLAGAFSSCKELRSLSGFWDVVPAYLPAIYSVCSRISSLNLSYA
TIQSHDLIKLVCHCPSLQRLLVLDYIEDSGLEALASSCKDLQELRVFPSDPFGAEPNVSL
TEQGLVAVSLGCPKLQSVLYFCHQMTNSALVNIAQNRPNLTRFRLCIIAPRKPDYVTLEP
LDVGFGAIVQHCKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCSFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVID
ERGPPDSRPESCPVEKLYIYRSVAGPRFDMPPFVWTMDDEDSALRLS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaatggcgtattcgttcccagatgaggtgctggagcatgtcttctcgttc
atacaatcagataaagaccgaaacgcggtatcgatggtgtgcaaatcgtggtacgagatc
gaacggtggtgtcggaggaagatattcatcgggaactgttacgctgtgagccctaggatt
gtgatcagacggttcccggaaattagatccgtcgaactgaaagggaaaccgcactttgcg
gatttcaatctggtaccggaaggttggggtggttacatccttccgtggatcgtggagatg
gccggcgcctatccatggctcgaagagattcggcttaaacggatggtcgtcacggatgaa
agtttggagcttattgctaagtcgtttaagaatttcaaagtgttggtgctttctttttgc
gaagggttctcaactgatggactcgctgccattgctgctagttgcaagaatctgaaagag
ctggacttgcgagagagtgaagtggatgatttgagtgggcattggctcagccattttcct
gagacgtacacatccctggtgtctcttaatatttcttgcttaggatctgatgaagttagc
ttctcagccttagagcgtttggtaggtagatgtcccaacctgaggacgcttcagctcaac
cgtgcagtgcctcttgataaaattgccactatattacgtcgtgcaccacagcttgttgaa
tttggcactggtacctatgcagctgagcttcgaccagatgtcttctcaaatttggctgga
gctttttctagttgcaaagaactgaggagcttgtctgggttttgggatgtggtcccagct
taccttccagctatttactctgtctgttctagaatatcgtcattaaacttgagctacgct
actatacaaagtcatgatcttataaagcttgtatgccactgtccaagtttgcagcgccta
ttggtacttgattacattgaagatagtggccttgaagcacttgcatctagttgcaaggac
ctacaggaattacgggtgtttccatctgatccatttggtgcagaaccaaatgtatccttg
acagaacagggccttgtcgccgtttctttgggttgtcctaagctgcagtcagttttgtac
ttctgccaccaaatgactaattctgccttggtcaatattgcccagaaccgtccaaacttg
acccgttttcgactttgtataattgcgccaagaaaacctgattatgtgacccttgagcca
cttgatgttggttttggagccattgtacagcattgcaaggatctcaggcgcctttccctt
tctggtcttctcactgatcgtgtgtttgaatatattgggacatatgctaaaaagctagag
atgctgtctgtggcttttgcaggagatagtgatttgggactccatcatgtgctttctggg
tgtgaaagcctccggaaactggagattagggactgttcctttggggacaaggctcttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctctgtgagt
ttcggagcatgtaagctgctaggtcagaagatgcccaggttgaatgtggaagttatagat
gagaggggacctccagattcaagaccagaaagctgcccagttgagaagctctacatatat
aggtctgttgctgggccaagatttgacatgcctccatttgtttggacgatggatgatgaa
gattctgcattgaggctttcttga
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