Theobroma cacao (cacao): 18613513
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Entry
18613513 CDS
T02994
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18613513
Membrane trafficking [BR:
tcc04131
]
Autophagy
Other autophagy associated proteins
Others
18613513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
Beta-prop_Vps41
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
KNTC1_N
PEP5_VPS11_N
Ge1_WD40
Beta-prop_TEP1_2nd
DUF7099
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
18613513
NCBI-ProteinID:
XP_017969699
UniProt:
A0AB32VUM8
LinkDB
All DBs
Position
1:30872079..30875452
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AA seq
423 aa
AA seq
DB search
MATLSAYPSPNPNPNFLSSTDQTNQESLPQIQHHASPDGDPNPTPTPNSNPNFHTPLSTP
PEAISPAAPQPSLLHLSFNQDHGCFASGIDQGFRIYNCDPFREIFRRDFDSGGGGGGGIG
VVEMLFRCNILALVGGGPNPQYPPNKVMIWDDHQSRCIGELSFRSEVRSVRLRRDRIVVV
LEQKIFVYNFADLKVLHQIETIANPKGLCAVSQGAGSLVLVCPGLQKGQVRVEHYASKRT
KFIMAHDSRIACFALAQDGQLLATASTKGTLVRIFNTVDGTLLQEVRRGADRAEIYSLAF
SLNAQWLAVSSDKGTVHVFSLKINAASPGSDRSQSASDPVTSPHSSLSFIRGVLPKYFSS
EWSVAQFRLVEGSQYIVAFGHQKNTVVILGIDGSFYRCQFDPVNGGEMTQLEYHNFLKPE
AAF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctcagcttatcctagccctaaccctaaccctaattttctttcctcgact
gatcaaaccaaccaggaatctctccctcagattcagcatcacgcttctcctgacggggac
ccaaacccgactcccacccccaactctaatcctaattttcacaccccactttcgactcca
cccgaggcgatttctccagccgcgccgcagccttctctcctccacctctcctttaaccag
gaccacggctgcttcgcctcaggcatcgaccagggcttccggatctataattgcgatcct
ttccgcgagatctttcgccgagatttcgatagtggcggcggcggcggcggcggcatcggc
gttgtcgagatgctttttcggtgcaatattttggcactcgttggcggtggacccaacccg
caatacccgcctaataaggttatgatctgggacgaccaccagagccgatgcatcggcgag
ctttcttttcgttcggaagtaagatcggttcggcttcggagagaccgaatcgttgtcgtt
ttggaacagaaaatattcgtatacaattttgcggatttgaaagtgctgcaccagattgag
accatagcgaatccgaagggactttgcgcagtatcccagggggccgggtccttggttttg
gtttgtcctggactgcaaaagggccaggttagggtggagcattacgcctcgaagaggact
aagtttattatggctcatgattcgagaattgcgtgctttgcacttgcgcaggatgggcag
ttgctcgctactgcgagcactaaagggacactggttcgcatttttaataccgttgacggt
accttgctgcaagaggtaaggaggggtgcagatagagctgaaatttatagtttggccttc
tctttaaacgcccagtggttagcagtttcaagtgacaagggcaccgtccatgttttcagc
cttaagattaatgctgcatctccaggctctgacaggtcacaaagtgcatcggaccctgtt
acatcaccccactcctctctttcttttatcagaggagtgttacccaagtacttcagctca
gaatggtcagtggctcagttccgcctggttgaaggttctcagtacatcgttgcttttggt
caccaaaagaatacagtggtgattcttggcattgacggaagcttctaccgatgccaattt
gacccagtgaatggtggggaaatgactcagctggaatatcacaactttctgaagccagag
gcagctttctga
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