Theobroma cacao (cacao): 18613557
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Entry
18613557 CDS
T02994
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18613557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18613557
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
SR proteins
18613557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
18613557
NCBI-ProteinID:
XP_007050915
UniProt:
A0AB32VR93
LinkDB
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Position
1:complement(31222772..31227763)
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AA seq
309 aa
AA seq
DB search
MSSRSSRTLYVGNLPGDVREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAED
AIRGRDGYDFGGHRLRVELAHGGRGRSSVDRHSSFSGGRGRGPSRRSEYRVLVTGLPSSA
SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYV
RVREYDSKRDSSRSPSRGRSLSRSRSRSRSRSRSRSRSRSRGRSYSRSKSHSKSPRAKPS
RKSPAKSRSRSASRSRSASRTRSLSRSRSRSRSPLPSRQKGRSKSPKRRTVSRSPSGSRS
RSRSKSLSR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgttcgagtcgaactctgtatgttgggaatcttcctggcgatgtacgcgag
agggaagtggaagatttgttttacaagtatggtcctatagcccatattgacctgaaaatt
ccaccgaggcctccaggttatgcatttgttgagtttgaagaggctcgagatgctgaagat
gctattcgtggtcgtgatggctatgattttggaggacatcgtttgcgggttgaacttgca
catggtgggcgtgggcgttcatcagtagatcgtcatagcagttttagtggtgggcgtggg
cgtgggccatccagacgttctgaatatcgtgtgttagtcactggattgccatcttctgct
tcatggcaggaccttaaggatcacatgcgtcgagctggggatgtttgtttttctcaagtt
ttccgtgatggtagtggaacaacagggattgtggactacaccaactatgatgatatgaaa
tatgctattaagaaacttgatgactctgagtttcggaatgcattttctcgggcttatgtt
cgggttagggaatatgattctaagcgggactcctctagaagccctagtcgtggtcgatca
ctctcaagaagccgtagccggagccgaagccgtagtcgcagccgtagccgcagccgcagt
cgtggacggagctatagtcggagcaagagccacagcaagtctccaagagcaaaaccttcg
cgaaagtcaccagcaaagtcaagatctaggtctgcttctcgttcccgctctgcatcaagg
actcgctctttgtcaagatctcgatcaagatccagatctcctttgccttctcgtcaaaaa
ggaaggagtaagagtccaaaaagacgcactgttagcaggagtccaagtgggagcagaagc
aggagtaggagcaagagtttatccaggtaa
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integrated database retrieval system
