Theobroma cacao (cacao): 18613634
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Entry
18613634 CDS
T02994
Name
(RefSeq) syntaxin-42
KO
K08489
syntaxin 16
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
18613634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18613634
Membrane trafficking [BR:
tcc04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
18613634
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
FlxA
Prominin
Glyco_hydro_134
DUF3671
DGKD_4H
Motif
Other DBs
NCBI-GeneID:
18613634
NCBI-ProteinID:
XP_007051030
UniProt:
A0AB32VSW8
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Position
1:31644746..31647385
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AA seq
322 aa
AA seq
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MATRNRTVQYKKHRDALKSVRAPLSSSASGSGGPVIEMVNASFLRSNRPSYTPLSTEEDP
GPSSSGAFTIGLPPVWIDDSEEIAANIQRAKVKMAELVKAHSKALMPSFGDGKEDQRAIE
GLTKEITDLLRKSEKRLQKLSSNGSSEDSNLRKNVQRSLATDLQSLSMDLRRKQSTYLRR
LQQQKEGQDGVDLELNLNENRNRLEDSEFSDVGFNEHQMSKLKQSEFSTLEREREITQVV
KSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLQKAERTQKKGGMVMC
ATVLVILCFIMIVLLVLKELFL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaactagaaaccggaccgtccagtacaaaaagcacagagacgcattaaagagcgtt
cgagctcctctctcttcctcagcgtccggttccggtggtccggttattgaaatggttaac
gcttctttccttcgctccaatcgtccctcttacactcctctcagcaccgaagaagaccct
ggtccttcaagtagtggtgcctttacgataggtttgccgccggtttggattgacgattcg
gaagaaatagcggcaaatattcaacgagctaaggtcaagatggcggagttagtcaaagct
cattccaaggctttaatgccttcatttggagacggcaaagaagatcaacgcgcgattgag
ggtttaaccaaagaaattacagatctattaaggaaatcagaaaagagattgcaaaagctg
tcgagcaacggatcgtccgaggattccaatctcagaaaaaatgtgcagcgttcacttgcg
actgaccttcagagcctgtccatggacttgcggcgaaaacagtcaacttatttgagacgg
ctgcagcagcaaaaagagggacaggatggtgttgacttggagttgaacttgaatgagaac
agaaatagattagaagatagtgaattcagtgacgtgggttttaatgagcaccaaatgagc
aagctgaagcagagtgagttttcaaccctagaaagggagagagaaatcactcaggttgtc
aagtcagtaaatgagcttgctcaaattatgaaagatctctcagtccttgtgatagaccag
ggcacgattgtcgatcggatagactacaatatccaaaacgtagctacatctgtcgaggag
ggcttcaaacagctccagaaggctgagcgaacacagaagaagggaggaatggtgatgtgt
gcaacagtgcttgtaattttatgcttcatcatgatagtccttttggtcctcaaagagtta
ttcttgtga
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