Theobroma cacao (cacao): 18613892
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Entry
18613892 CDS
T02994
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
18613892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18613892
Membrane trafficking [BR:
tcc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
18613892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
TPR_VPS8_2
zf-RING_Vps41
zf_RING_Vps8
Beta-prop_EML
WD40
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
18613892
NCBI-ProteinID:
XP_017985195
UniProt:
A0AB32X2C5
LinkDB
All DBs
Position
1:complement(33105658..33117406)
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AA seq
1940 aa
AA seq
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MELDIDSLLDSHVCSDSEDDSNSIIPRRTIDEILNDSDSSTSSSSPSSPPSIRPYSTNHL
PRSKTVPQDFAESLKGSDAVSQGPAESSKPSPFSRTGDPIWRVSSSSSSSKQLPTLFGGV
RSNAKPGAALAAAAAASRSLPTPHAAAIKSRRAGSGGVLQKVIDSDDHEVSSLNGESIGV
SSESSVSGEKLEIDDSNDNNKMGDFQSADTHENGNVVDNKDKESETDKVIEQVDACSKLD
FDENLTEEVTISGSVEVFDKEIQSVFVDETSMVLDENDSDKKSVSSLTGVDQERSIDKDL
VMVDVERENLTNDTGSREDGEAGVGDGADIGGGDDASSISDISELVEERLEQLESERIRK
RAEKDSRATMKPLEFAEELEMKQASTGLHWEEGAAAQPMRLEGVRRGSTTLGYFDVEANN
AITRTLTSQAFRRDHGSPQVLAVHLNFIAVGMTKGVIILVPSKYSAHHADNMDPKMVILG
LQGDRFLAPLTSLCFNQLGDLLLAGYGDGHVTVWDVQRASAAKVITGEHTAPVIHTLFLG
QDSQVTRQFKAVTGDSKGLVLLHAFSVVPLLNRFSIKTQCLLDGQRTGTVLSASPLLFDD
SCGSTLMTSQGNATSSIGSKMGGVVGGDAGWKLFAEGSSLVEEGVVIFVTYQTALVVRLT
PTLEVYAQLSRPDGVREGSMPYTAWTCMTQPRGSSSENTQSETAERVSLLALAWDRKVQV
AKLVKSDLKVYGKWSLDSSAIGVTWLDDQMMVVLTVTGQLYLFARDGTVIHQTSFAVDGS
GGDDLVAYHTHFINIFGNPEKAYHNCVTVRGASIYILGPMHLAVCRLLPWKERIQVLRKA
GDWMGALNMAMTLYDGQAHGVIDLPRNLDLVQEAIMPYLVELLLSYVDEVFSYISVAFCN
QIGKKEQPDDPESRNGSVHSEIKEQFTRVGGVAVEFCVHIKRTDILFDEIFSKFMAIQQR
ETFLELLEPYILKDMLGCLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVIL
CREHGLYGALVYLFNKGLDDFKAPLEELLVVLRNSQRESASGLGYRMLVYLKYCFTGLAF
PPGQGTLPPSRLSSLRTELLQFLLEVSDGQDRKSASTLAFGGAYLNLYYLLELDTEATLD
VLKCAFIEDKSPKPDSSFSESGNANVEARKENDLMAESDTILVQKTVDALVHVLDKNVSR
TDGLPSNDDTESIDAWPSKKDMGYLFEFIAYYVACGRAKISKIVLNQILEYLTLENNIPQ
SVSTISTETSKRREMQLLALLEVVPESDWDQSYVLQLCENAHFCQVCGLIHAIRRQYLAA
LDSYMKDVEEPIHAFVFINNTLMQLSGGGHATFRSAVISRIPVLVNLSREGTFFLVIDHF
NDESSHILSELNSHPKSLFLYLKTVIEVHLSGTLNFSYLREEEIVDVFSGRRGKDQSEEL
EAYLERISNFPKFLRSNPLNVTDDMIELYLELLCQFERDSVLKFLETFDSYRVEHCLRLC
QEYGIIDGAAFLLERVGDVGSALLLTLSGLNDKFTQLDTAVGSGVSKVSLGGSASMQHFN
SVLKMKEVNDICNALRACIELCQRNTPRLNPEESEMLWFRLLDSFCEPLMGSYCEERVSE
KENHVGMLVESLGSQEEEDCIIKWRIPKSHKGSHILRKLFSQFIKEIVEGMIGYVRLPTI
MSKLLSDNGSQEFGDFKLTILGMLGTYGFERRILDTAKSLIEDDTFYTMSLLKKGASHGY
APRSLLCCICNSILTKNSSSFRVRVFNCGHATHLQCELLENEASTRGFSSGCPVCLPKKN
TQKSRNKSALTENSLVSTLPSRTLPAQGSTLYPHESDALDNSHGLQQISRFEILSNLQKD
QRLAQIEILPQLKLAPPAIYHEKVKKRSELLAGESSSHLGAIEKPSKSKQLRELKLKGSS
SLRFPLKSSIFAGKEKTSKR
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgacattgactcgttacttgactcacacgtctgctccgattccgaggacgat
tccaactctatcatccctcgccgcaccatcgatgaaatcctcaacgactccgattcttcg
acgtcatcctcctcaccctcttctcctccttccattcgcccctactccactaaccacctt
cctcggtcgaagaccgttccgcaagactttgcggaatctctgaagggaagcgacgcggtt
tcgcaaggaccagcggaatcctcgaaacctagccccttctcgcggactggggatccgata
tggagggtttcgtcatcgtcttcttcctcaaaacagttgccgacgctgtttggcggagtg
agatccaatgcgaaacccggagcggcactcgctgcggctgcggcggcgtcgaggtcgctt
ccaaccccgcatgcggcggcgatcaagtcgagacgagcgggaagcggtggggttctccag
aaggttatagatagtgatgatcatgaggtaagctcattgaatggggaatcaattggggtt
agttcggaatcaagcgtttcaggtgaaaaattagaaattgacgattctaatgataataat
aaaatgggcgattttcagtctgctgatacccatgaaaatggtaatgttgttgataataaa
gataaggaaagtgaaacggataaagtaattgaacaagtggatgcctgttctaagcttgat
tttgatgagaacttaactgaagaagttacaatttcgggttcagtggaagtttttgataaa
gaaattcaatctgtttttgttgatgagacttctatggttcttgatgagaatgattcggat
aaaaagagtgtttcatctttgaccggggttgatcaggagagaagtatagataaggacttg
gtgatggtggatgtggaaagggagaatttaacaaatgatacgggtagtcgtgaagatggt
gaggcaggtgttggtgatggtgctgatattgggggtggtgatgatgcaagttcaataagt
gatatttcggagcttgtagaggagagattggagcaattagagagtgagagaattaggaaa
agggcagaaaaggattcacgtgccacaatgaagccacttgaatttgctgaagagcttgag
atgaagcaggcttctactggtttgcattgggaggagggtgcagctgcccaaccaatgcgg
cttgagggtgttaggaggggttcaaccacattgggatactttgatgttgaggctaacaat
gcaatcactcggactcttacatcacaggcattcaggcgtgatcatggctcccctcaagtt
ttggcagtccatttgaattttattgcagtgggaatgactaaaggagtcataatcctagtg
ccaagtaaatactctgctcatcatgctgacaacatggatcctaagatggtgatacttggt
ttgcaaggggatcggttccttgcccctttaacgtccttgtgcttcaatcagctaggagac
ctgctcttagctggctatggtgatggtcatgttacagtttgggatgttcagagggcatca
gctgcaaaagttattactggagaacatactgcaccggtgatacatacattatttctgggg
caggattctcaagttactcgccaatttaaagcagttacaggtgatagtaaaggcctggtc
ctcttacatgctttctcagttgttcccttgcttaataggttctcgatcaaaacgcagtgt
cttcttgatggacaaagaacgggcactgtcttgtcagcttcaccccttctttttgatgat
tcatgtgggagcactttgatgacctctcaagggaatgctacaagcagtattggtagcaag
atgggaggtgtagttgggggagatgcaggttggaaactctttgccgaaggctcttctctg
gttgaagaaggtgtggtcatatttgtcacctatcaaactgctctggtggtaaggcttact
ccaacattagaagtctatgcacaactttctaggccagatggtgtgcgggagggttccatg
ccttacactgcatggacatgtatgacacagcctcgtggctcttcatcagaaaatacacaa
tcagaaacagcagaaagagtttcactgcttgctcttgcatgggatcggaaagttcaggtt
gcaaagttggtcaaatcagacctgaaagtatatgggaaatggtctcttgacagttcagcc
ataggtgtcacttggttggatgatcagatgatggtggttcttacagtgacaggacagctc
tatttgtttgctagggatggaactgtgattcaccaaacaagtttcgctgttgatggttct
ggaggagatgatcttgttgcatatcatactcacttcattaatatctttggaaaccctgaa
aaagcttatcataattgtgtgactgtgagaggagcttccatatatatactaggacctatg
catcttgctgtatgccgacttcttccatggaaggaaaggattcaggttctacggaaagca
ggtgactggatgggagctttgaacatggcaatgacactttatgatggccaagcccatggt
gttattgaccttccaagaaacctggatttggtgcaggaggccataatgccctatcttgtg
gagttgcttttgtcatatgtagatgaagtgttctcctatatttcagtggcattttgcaac
caaattggtaaaaaggagcagccagatgaccctgaaagtagaaacggttctgtgcactct
gaaataaaagagcaattcacccgtgttggtggtgttgccgttgaattttgtgtccatatc
aagaggactgacattctttttgatgaaattttctccaaattcatggctattcagcaaaga
gaaacatttttagagcttttggagccgtacatattgaaggacatgcttggatgtttacct
cctgagatcatgcaagcactggtagagcattacagcagcaaaggatggttgcagcgagtg
gaacagtgtgttcttcacatggacatttcttccttggacttcaatcaggttgtcatttta
tgtcgggagcatggtttgtatggtgctctagtgtatcttttcaacaaaggattagatgat
ttcaaggcacctttggaggagttgttggtagttttacgaaatagtcaaagagaaagtgct
tctggcctgggatacaggatgcttgtttacttgaagtactgctttacaggtcttgctttt
ccaccaggacaaggtactcttccaccctcacgcttgtcgtctcttaggacagaacttctg
caatttttgttggaggtttctgatggccaggatcgaaaatcagcttcaactttggctttt
ggaggggcataccttaacctgtattatctcttagagttagatactgaggctactttagat
gttctcaaatgtgctttcatagaagacaaatcccccaaacccgactcctctttttctgag
tctggcaatgcaaatgtggaagctagaaaggaaaatgatttgatggctgaatctgatact
attttggttcagaaaactgttgatgctctggttcatgttcttgataagaatgtctctcga
acagatgggcttccaagcaatgatgatactgaatcaatagacgcatggccttcaaaaaag
gacatgggctatctgtttgagttcattgcatactatgttgcatgtggaagagctaaaatc
tcaaaaattgttctaaatcagattttggaatacttgactttagaaaataatattccacaa
agtgtttccaccattagtactgaaacatccaaaagaagagagatgcaattactcgcactt
ttagaagtagtgccagagagcgattgggatcaatcttatgtgttgcagctatgtgagaat
gcacacttttgccaggtttgtggcttaattcatgccatcagacgtcagtatcttgctgct
ctcgatagctatatgaaagatgtggaggagccgattcatgccttcgtttttatcaacaat
acattaatgcagctgagtggtggaggtcatgctacttttcgatcagcagtcatctctcga
attccagtgctggttaatttaagcagagaggggacattcttcttagttattgaccatttc
aatgatgagagttcgcatatattatctgaacttaactctcatccaaaaagcctttttctt
tacttaaagacagtcattgaggttcacttatctggcaccctcaacttctcttatttaaga
gaagaagagattgtggatgtctttagtggaagaagggggaaagatcagtcagaagagctt
gaagcatacttggaaagaatctccaatttccctaagttcctgcgaagtaatcctcttaat
gtaactgatgacatgattgagctttatttggagttattatgtcagtttgaacgggattca
gttctcaagttcttggaaacttttgatagctatcgagttgaacattgtctacgcctttgc
caggaatatggaataatagatggggcggcatttttattagaaagggttggtgatgttggt
agtgctcttttacttacactttctggccttaatgataaatttacacaacttgatactgct
gtcggaagtggtgtctctaaagtttctttaggtggatctgccagcatgcagcatttcaat
tctgttttaaaaatgaaggaggtgaatgatatatgcaatgcattgcgtgcctgtattgaa
ttgtgccagcggaatacccctcgtttgaatccagaagagtctgagatgctttggtttaga
ttacttgactcattttgcgaacctttgatgggttcgtactgtgaagaaagggtatctgag
aaggaaaatcatgtgggaatgctggttgaatcattgggttctcaagaggaagaggactgc
ataatcaagtggaggatcccaaaatctcacaaaggtagccatatattgaggaaattgttc
tctcagttcatcaaagagattgttgagggaatgataggatatgttcgacttccaactatt
atgtccaaactcctatctgataatggtagccaagaatttggagattttaagcttacaata
ttgggaatgctgggaacttatggctttgaaagaagaattctggatactgccaaatctttg
atagaggatgacacgttctacaccatgagcttactgaaaaagggagcttctcatggatac
gccccccgaagtttactgtgttgtatatgcaacagcattcttaccaagaattcttctagc
tttcgagttcgagttttcaattgtggtcacgcaactcatcttcaatgtgagcttctggaa
aatgaggcatcaactaggggcttctcttctggatgccctgtttgtttgcctaagaagaat
actcagaagtctagaaataaatctgctcttacagaaaatagcttagttagtacattgccc
tcaagaaccctaccagcacaaggatcaacattataccctcatgaaagtgatgcactagat
aattctcatggccttcagcaaatatcacggtttgaaatcttaagtaaccttcaaaaagac
cagagattagcccagatagagattttgcctcagttgaagcttgcacctccggctatttat
catgaaaaagtgaagaaaaggagtgaacttttagcaggagaaagcagcagtcatcttggt
gcaatagaaaaaccaagtaaaagcaagcaactcagggagctaaagttaaagggatcatca
tctctcagattcccactaaaatcaagtatattcgcaggtaaggagaaaacaagcaaacga
tag
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