Theobroma cacao (cacao): 18613934
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Entry
18613934 CDS
T02994
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18613934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18613934
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
SR proteins
18613934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_3
RRM_5
RRM_Nup35
RBD_RDR6
RRM_fung
Motif
Other DBs
NCBI-GeneID:
18613934
NCBI-ProteinID:
XP_007051482
UniProt:
A0A061DUB0
A0AB32VRW9
LinkDB
All DBs
Position
1:33400531..33403473
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AA seq
254 aa
AA seq
DB search
MRPVFVGNFEYETRQSELERLFSKYGRIERVDMKSGFAFVYFEDERDAEDAIRGLDNIPF
GYDRRRLSVEWAKGERGRHRDGSRSTTNQRPTKTLFVINFDPIRTRERDILRHFEPYGKV
LHVRIRRNFAFVQFATQEDATKALEATQRSKLLDRVVSVEYALRDDDERDDRYESPRRGG
GYRRRGDSPYGRSPSPAYRRRPSPDYGRARSPVYDRYNGPAYDRRKSPEYGRHRSPEHGS
GRYRSQSPARRSRT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgtttttgtggggaactttgagtacgagactcggcagtcggagctggagcgt
ttgttttcaaagtacgggaggatcgagcgcgtcgacatgaaatctggatttgcttttgtt
tattttgaggatgaacgtgatgctgaagatgctattcgtggacttgataatattcctttt
ggttatgaccggcgtcgactgtctgtggagtgggctaagggtgaacgtggtcggcatcgc
gatggttctaggtctacaacaaatcagaggcccactaaaaccttgtttgttatcaacttc
gatccaattcgtacaagggaacgagatatactaaggcactttgagccatatgggaaggtt
cttcatgttcgcattaggaggaactttgcattcgtgcagtttgcaacacaagaggatgct
acaaaagccctcgaggctacacaaaggagcaagttgctggacagggttgtgtctgttgaa
tacgctttaagggatgatgatgagagggatgacagatatgagagccctagaagaggtggt
ggttatcgtagacgtggtgatagtccatatgggaggtcaccaagtcctgcatatcgcagg
cgacctagccctgattatggtagggctcgaagtcctgtttatgatcgctataatggtcct
gcttatgacaggcgcaagagtcctgagtacgggaggcacaggagtcctgagcatggcagt
ggcagatatcgcagccagtcacctgcccgaaggtcccgcacttag
DBGET
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