Theobroma cacao (cacao): 18613956 Help Entry 18613956          CDS       T02994                                  Name (RefSeq) uncharacterized LOC18613956   KO K24155   rabconnectin-3a Organism tcc  Theobroma cacao (cacao) Pathway tcc04142   Lysosome Brite KEGG Orthology (KO) [BR:tcc00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     18613956  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tcc04131]     18613956 Membrane trafficking [BR:tcc04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     18613956  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     18613956    RAVE complex     18613956 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML WDR55 Beta-prop_WDR5 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st EIF3I ANAPC4_WD40 Motif Other DBs NCBI-GeneID:  18613956 NCBI-ProteinID:  XP_017982178 UniProt:  A0AB32WRQ4 LinkDB All DBs Position 1:33532137..33546916 Genome browser AA seq 2578 aa AA seqDB search MAGPTPTSRNATYDSELDPTDHLPLSLLRSELIPAAPNRSESSIDWLPDFAGYSWVAYGS SSLLVISHFPSPLSPEQNLMGPIFRQVFELSSDASSPVTAVCWSPVTPSAGELAAASGNC IFLFSHDLETSNSESSFCWSQNVELLQCTKVEAVEWTASGDGILAGGLEVILWKRKSKSW EIAWKFKADLPQNLVSASWSTEGPSAAASHSKVLQIEGEVINEPSKSVLVFYSDGNSGYA KATLGHPQPVSMIQWRPSGGKQLSRDAKHLRRHILLTCCLDGTVRLWSEVDNGRVKKPGK DGIYDHKITIRSFCVAAVIEIDCALRGTLGVDIFLKWATEIGGIVKTGEETKKYFCTEGD KREVGRCEWLIGFGPGKLVTFWAIHCLDDMTPMKFPRVTLWKRHELQDFEVEHLHRNGLS TLKQQLVLKKVVIMRTCLSGPPIVCSLIHLFPFQSMAWSMLYTKTSNDMKDASPNESRIE NLLSCSVGGILDIDGHTSKILQIAIHPYVCEFELAVSLDSNGLLLFWSLSTNSNSIHDLP TLIPTWKICGKYVSQDKCSKYTSLRWAPLVLREDRVLLIGHVGGIDCFAVKIFEGGEDVV CHYICTIPFTGHDPYKDGPTNIYSVPLSLSCNKTSMCDGFLLLGIWMKEFQALSWEIKIH AYALTGSNSECNFDDNSLVECSARKLENTISGTRYCVHVIPSSAQLPEPHLHDQVTSSAV ICPSGLTPMQQKLTFDNDPYSCKSPAYVMATGCSDGGLKLWRFNPYDPSISHMPWELVGM FTAHQGPVSAICLTNCGRKIATIGSDSQSNAVSNLRIWDSIRLADSGTFMLEDTLSLNED VVALNWLNLGNGQLLLAVGMHNELRVYAQKRCGGQALLNSKKPLGMQIWFCIGISHTFSA IHDFLWGPRTTGVVVHASYVSLLSPWLFLLDKKHQTESNPNFITESLLDSEIGMNEGTLS ETFSDRDAINYKETLIENGNGGCKSGLLGKITTKDDHLSNTFLVGRAQLKQKSKILLGFW SMLDIVEMLAGVLPVYHPEALFANIYSGNWKRAYISVRHLVEYLNSSYISEKIYHHPKRS DIVPQIPLSNYIEGILSNSSTENAFRWSGNATSMASSLQFQSGLTQFAYNLAPDASSNMF SLSSSKSGLRDFLEPINKLHELAAITAAEKMQILAIIDLLNEVSNPQSASVYENLDEPGR RFWVTLRFQQLLFSQSFGRSASLEELVVDSGLMVWAFQSDCQETLFGSLLPNEPSWQEMQ TLGVGFWFTNATQLRTRMEKLARSQYLKKRDPKDCTLLYVALNRLQVLAGLFKISKDEKD KPLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAIAFFLLGGDTSSAVTVCAKNLGDE QLALIICRLIEGRGGPLERHLITKIILPSAIERSDYWLASLLEWELGNYPQSFLIMLGLQ VGSAIDASTLSSCHVAFMDPSVGLYCLTLANNTSMRNAVGDQNAGVLARWASLMSATSLN RCGLPLEALESLSTSLSILGGTDQENVSDIASSKISLGIWKPSIDDSSNWLLGDVALHLE FYAKLDLALQYISKLIREHPSWPRTSVGSVGVNTCSEDHEIQYDKLLENFQHKLCTALAQ FEQKFLLVSSCLIDMIFVSLWSNGFWFLGYDILHGYSHECSQYENHIIDSSLRYPLLHKP LLKVTEDISFLFSHLIAACSITWSASKSCYMENGASHEVRSNWLYAWGCYFQGVRLSLWN LKAAVRIFSANYKEADTSKLLTLLDFYEYYANFASAWLQKNSKGLVLMVQPLLVSYTNGH TPYEVDMSILKKVSYQVADTVTQNTLINDIIGGLEVARCAEDKKVRELLHSIPEDERWHI IGAFLWQHMSRFMKHKLDSIAVLLDDTCPSGFSYGKLSSCAPGSVDFESDTKSIREKIRS LSWILAKLLKIALEHISSYHVKQLVLFLQQKIDNGFHPPTLVWLEESKLSSRTLHQHLGQ GIVGEDITNSTNQLSASYVLWNICADPTLISESFAHEKINWSSNFHFKPSKGWGEVYKDI KGEHESDKSHNHGGRISNSSSGGEAGSPSRSLFRNGHTFLSSSQKDTIMEKEVTPFQNPK EIYKRNGELLEALCVNSIDQRQAALASSRKGIIFFNWEDGMHDIDQSDYIWSGADWPHNG WAGCESTPVPTCVSPGLGLGNNKGAQLGLGGATIGVGSLARPGRDLTGGGAFGIPGYAGI GASGLGWAVQGDFEEFVDPPATVENISTRAFSSHPSRPVFLVGSINTHIYLWEYGKDKAT ATYGVLPAANVPPPYALASISALQFDHCGHRFATAALDGTVCAWQLEVGGRSNIRPTESS LCFNNHASDVAYVTSSGSIIAAAGCSSNGVNVVIWDTLAPTATSRASIICHEGGARSIAV FDNDIGSGSISPLIVTGGKNGDVGLHDFRYIATGRTKRHRYHDGVETSINRSSSTDMRTG ASNQLQDQNHSGMLWYIPKAHLGSITKISTIPNTSLFLTGSKDGDVKLWDAKAAKLVYHW SKLHERHTFLQPSSRGFGGVVRAAVTDIQVVSHGFLSCGGDGSVKLVQFNDYLHGTLR NT seq 7737 nt NT seq  +upstreamnt  +downstreamnt atggcagggccaactcccacttctcgaaacgcaacctacgattccgagttggatcccacg gaccacctcccgctttccctccttagatccgaactcataccggccgcaccgaaccgatct gaatcctccattgactggttaccggacttcgccggttactcatgggtagcctacgggtcc tcctctctcctcgtgatctctcatttcccttcccctctctcccccgagcaaaatcttatg ggcccaattttccgccaagtcttcgagctctcttccgacgcttcttcccctgtcaccgcc gtttgttggtctccggtcacgccttcggccggcgagctcgcggcagcctcggggaattgc attttcttattctctcacgacttggagacgtcgaattccgaaagttctttttgttggagc cagaatgtagaacttctacaatgtacaaaagttgaggcagttgaatggacggcctccggg gatgggatattagccggtggattagaggttattttatggaaaaggaagagcaaatcctgg gaaatagcttggaaattcaaggcagatctgcctcaaaatctggtttctgcctcctggtcc acagagggcccttcagcggctgcatctcattcgaaggttttacaaattgaaggagaagtg atcaatgagccaagcaagtctgttttggtattttacagtgatggaaactctggatacgca aaagccacgttaggtcatcctcaacctgtttcgatgattcagtggaggccatcaggaggg aaacaattgtcaagagatgcaaaacatttgcggagacatatattgttaacatgctgttta gatggaactgtgaggttatggagtgaggtcgataatggtagagttaaaaaaccaggcaag gatggcatttatgatcacaaaattacaataaggtccttttgtgttgctgctgtaattgag atagattgtgcattgcgtggaactctaggagtggatatatttttgaaatgggcaacagaa attggtggtatagttaaaaccggtgaagaaactaagaaatacttttgtacagaaggagat aaacgtgaagttggtaggtgtgagtggttaatagggtttggtcctggaaaattggtcact ttctgggcaatccattgccttgatgacatgactccaatgaagtttccccgagttacattg tggaagagacatgagcttcaggactttgaagttgaacatcttcatagaaatggactttca acattaaaacagcaattagttcttaaaaaggttgttatcatgagaacatgtttgtctgga cctccaattgtatgctctttgattcatttatttccttttcaatctatggcctggtccatg ttatataccaaaacatcaaatgatatgaaggatgcatcgcctaatgaatctaggatagag aatttgttatcatgttcagtaggtgggattttagatatagatggtcataccagtaaaatc ttacaaattgctatacatccttatgtctgtgaatttgaattggctgtttccttggattct aatggcctgcttctgttttggtctctttctaccaattccaacagcattcatgaccttccg acattgattcccacatggaaaatttgtggaaaatatgtaagtcaagataaatgttctaaa tatacaagcttgagatgggcacctttagtattgcgtgaagatcgggttcttcttattggg catgttggaggaattgactgctttgcggtaaagatttttgaaggtggagaagatgtagta tgtcactacatatgcactataccttttacaggtcatgatccttacaaggatggtccaacc aacatctattcagtaccattgtctttgtcttgtaataaaacttctatgtgtgatggattt ttgcttttgggcatatggatgaaagagtttcaggcactttcctgggaaataaaaattcat gcttatgctctgacgggaagcaactctgaatgtaattttgatgataatagtcttgttgaa tgcagtgcaaggaaattagaaaatacgatttctggcacaagatattgtgttcatgttatt ccttcctcagctcagttgcctgaacctcatcttcatgatcaggtcacaagttctgctgtg atctgtccgagtggtttgacacctatgcagcagaagttaacttttgataatgatccatat agttgtaaaagtcctgcatatgttatggctacaggctgctctgatggtggtttaaaattg tggagatttaacccctatgacccatcaatttctcacatgccatgggagttagttggtatg tttactgcacatcaaggtcctgtcagtgctatatgtttgaccaattgtggtaggaagatt gcaaccattggctcagatagccagtcaaatgctgtcagcaatcttcgtatatgggactct atacgcctagcagactcggggacttttatgttagaagacacattgtcccttaatgaagat gttgttgctttgaattggttaaacctaggaaatggtcagttattacttgcagttggcatg cacaatgaattacgggtatatgctcagaagcgttgtgggggtcaggctttgttaaactct aaaaagcctctgggaatgcaaatctggttctgcattgggatcagtcatactttttctgct attcatgatttcttgtgggggcccaggaccacaggtgtagttgtccatgctagttacgtg agtcttttaagtccatggctgtttcttttagataagaagcatcagactgaatccaatcca aattttatcaccgaaagccttcttgattctgaaattggtatgaatgagggaaccctttct gaaacatttagtgatcgtgatgccattaattacaaagaaacattaattgagaatgggaat ggaggatgcaagtctggtcttcttgggaagattactacaaaagatgatcacctatccaac acatttttagttggaagggctcaactgaaacagaagtcaaagatcttacttggtttttgg agcatgctagacatagtggagatgttagcaggagttttgcctgtttatcacccggaggca ctctttgcaaatatatattcaggcaattggaaacgtgcatacatctctgtgaggcatctg gttgaatatcttaattctagttatatttctgagaagatatatcaccatccaaagcgtagc gatattgttccacagatacctttgtccaattacattgaagggattctctccaatagttca actgagaatgcattccgatggagtgggaatgctacttcaatggcatcatctttacaattt caaagtggcttgacgcaatttgcttacaatttggcacctgatgcttccagcaatatgttc agcttgtcttcatcaaaatctggacttagggacttccttgagcctattaataagttgcat gagttggcagcgataaccgcagcagagaagatgcaaattcttgcaattatagatcttcta aatgaagttagtaatcctcagtcagcttctgtttatgaaaatcttgatgaaccgggtcga aggttttgggtcacattaaggtttcagcagctgcttttttctcaaagttttggtagatca gcatctttggaagagttggttgttgattctgggcttatggtgtgggcattccagtctgat tgccaggaaactttgtttggttctttactacctaatgaaccatcttggcaggaaatgcag actttgggtgttggattttggtttactaacgcaacacaactgcgcacaaggatggagaag ttggctagatcgcaatatcttaagaagagagatcccaaggattgtacactgttgtatgtt gcactaaatagacttcaagttttggctggtctatttaaaatcagcaaggatgagaaggat aaaccattggttggatttctttcacgcaattttcaggaggagaaaaataaggcagcagct ttgaaaaatgcttatgtcttgatggggagacatcaactagagctggctattgcttttttt ctgcttggaggcgatacttcttctgcagtcactgtttgtgcaaagaaccttggggatgag caactagcactaataatttgtagacttattgaggggcgaggtggaccattagagcgtcac ttgattacaaagattatacttccatccgcaattgagagaagtgactattggcttgcaagc cttctagagtgggaattggggaattatcctcaatcttttctgatcatgcttggtttacaa gtgggttctgctatcgatgcatccactctttcatcctgtcatgttgctttcatggacccc agtgtaggactgtattgcctcacattagcaaacaacactagcatgaggaatgctgtaggg gaccagaatgctggagttcttgctagatgggcatctttaatgagtgctacttccttaaac agatgtgggcttccacttgaagccttggagtctctttcaacttctctgagtattcttggg ggtacagatcaagagaatgtatcagatattgcatcttctaaaatttcacttggaatttgg aaaccatccattgatgattcctctaactggctattgggcgatgttgcgttgcaccttgag ttctatgctaaattagatttggctctccaatatatctcaaagttgataagggagcaccct agttggcctagaacctctgttggatctgttggagtgaatacatgttctgaggatcatgag attcagtatgataaattacttgaaaactttcagcataagttgtgcacagcgcttgcacag tttgagcagaagttcttattggtttcttcctgcctaattgatatgatttttgtctcattg tggagtaatgggttctggttccttggatatgatatcctacatgggtattctcatgaatgc agccagtatgagaatcatataattgacagttccctccgctatccccttttgcacaagcca cttttgaaggtgactgaggatatctcctttttgttttcacatttgattgctgcctgcagc ataacctggtccgcatcaaaatcatgttatatggaaaatggtgcatcccacgaagttaga tccaactggctatatgcctggggatgttactttcagggggtcagactatcattatggaat ttaaaagctgccgtgaggattttctctgccaactacaaagaggccgacacctcgaaactt cttactcttcttgatttttacgaatattatgcaaattttgcttctgcttggcttcagaaa aattcaaaaggtttagttctgatggtgcaacccctcttagtttcatatactaatgggcat actccatatgaagttgatatgtcgattctgaagaaagtgtcttaccaggttgcagatact gtgactcagaatacattgattaatgatataataggtggccttgaggttgctagatgtgct gaagacaaaaaagttcgagagctattgcattcaattccagaagatgagagatggcatatt ataggggcttttctgtggcaacacatgtccagattcatgaaacataaactagattcaata gccgttttacttgatgacacttgtccttctggtttttcctatggtaaactttcttcttgt gctcctggttcggtggattttgaatcagataccaagagcataagagaaaagattaggtca ttgtcatggatattggccaagttgctgaaaattgcacttgaacatatttcttcttaccat gtgaaacaacttgtgttgttcttgcagcagaaaatagataatggatttcaccctcctact cttgtatggttggaggaatctaaattgtcttctaggactctacatcagcatctgggtcag ggtattgttggtgaagatataacaaacagcacaaatcaactttctgcttcttatgtctta tggaatatctgtgctgatcctactctgatatcagaaagttttgcacatgagaaaataaat tggtcaagtaattttcattttaagccttccaaaggatggggtgaagtatacaaagacatt aaaggggagcatgaaagtgataagtcccataatcatggaggcagaataagcaatagttct tctggtggtgaagctggatcaccttctaggagtctgtttcggaatggacatacttttctg agttcctcacagaaagacacaatcatggaaaaggaggtcacacctttccaaaaccctaaa gaaatatacaagagaaatggggagcttttagaggcattgtgtgtcaactccattgatcaa aggcaggctgccctagccagcagccggaagggcataattttctttaactgggaagatggt atgcatgacatagatcaatcagattatatctggtcaggtgctgattggcctcacaatggt tgggctggttgtgaatcaaccccagttccaacctgtgtatctcctggtcttggtcttggt aacaacaaaggagctcaactggggttgggtggggcaaccattggtgtgggttctttagct agaccagggagagacctgacaggtggtggagcatttgggattccaggttatgctggtatt ggtgcctctggcttaggctgggcggtgcaaggagactttgaggagtttgttgatccgcca gctactgtagaaaacataagtacaagggctttctcaagtcacccctcaaggcctgtcttc ctggttggttctatcaatacacacatttacttatgggagtatggtaaggacaaagcaaca gcaacttacggagtgctgcctgctgcaaatgttcctccaccttatgctcttgcctcaata tcagctttgcagtttgatcattgtggacacagatttgctactgctgcactagatggaaca gtttgcgcatggcagctggaggtgggaggcaggagcaatatccgtccaacagaatcatct ctctgttttaataaccatgcatcggatgtcgcttacgttacttcaagtggatcaatcatt gctgctgctggatgtagctccaatggtgttaatgtggttatatgggatacattggcaccg actgcaacctctcgggcatccattatttgccatgaaggcggtgcccgctccattgctgta tttgacaatgacataggaagtggttctatttctcccctaatagttactggtggtaaaaat ggtgatgttggacttcatgactttcggtacatagctactggaaggactaaaaggcacagg taccatgatggtgttgaaacaagcatcaacaggtcttccagtactgacatgaggacagga gctagtaatcaattacaggaccagaatcacagtgggatgctttggtacataccaaaggct cacttaggtagtatcaccaaaatatcaaccatcccaaataccagtttgttcttaacggga agcaaagatggagatgttaaactttgggatgccaaagcggccaagttggtttatcattgg tcaaaattgcatgaaaggcacacctttttgcaaccaagctctcgtggttttgggggtgtt gtgcgggctgctgttactgatattcaagttgtgtcacatggttttctttcatgtggtgga gacggctctgtaaagctggttcagttcaatgattacctacatgggacattaagatga

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