Theobroma cacao (cacao): 18613991
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Entry
18613991 CDS
T02994
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18613991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcc04040
]
18613991
Ion channels [BR:
tcc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
18613991
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
18613991
NCBI-ProteinID:
XP_007051571
UniProt:
A0AB32VSC0
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Position
1:complement(33755482..33759786)
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AA seq
709 aa
AA seq
DB search
MNFRRDKFVRFQDWSSDDGSFAEKVRPSFNAVMGGLRRGFEKGFERIRSLKKPISFRSWG
NKPTKKRALGSRKSILNPQGQFLQNWNKIFLLSCTIALALDPLFFYIPVMDGKRKCLNLD
EKLEITACVLRTFMDAFYILHIIFQFRTAFIAPSSRVFGRGELIEDRWAIAKRYLSKNFI
IDILAILPFPQMVILIIIPTLKGPISLVTKEWLKYIIFCQYVPRILRIFPLYKEVTRTSG
LLTETAWAGAALNLFLYMLASHFVGALWYLISIEREDRCWRDATPSGERVALYCEDNSPI
NYDLVRLLNTSCPFTNPDDITDPKVFNFGIFIDALESGVVETWDFPEKFFYCFWWGLRNL
SSLGQNLKTSTFVGEIIFAIFISIAGLILFSLLIGNMQKYLQSTGVRIEEMRVKRQDAEQ
WMSHRMLPKSLRERIRRYEQYKWQETRGVVEETLINNLPKDLKRDIKRHLCLALLKKVPM
FEKMDERLLDAMCDRLKLALYTDKSYIVREGDPVEEMLFIIRGNLVSTTTNGGRTGFFNA
VHLKAGDFCGDDLLTWALDLQSSSNLPISTRTVQALKEVEAFALMADDLKFVASQFRRLH
SKQFQHTFKFYSVQWQTWAASFIQAAWRRHCKRKLVKSLREAEDKLQDALAKESGTSPSL
GATLYASKFAANALRNLRHSNSQTTRLPQRLPPLLPQKPAEPDFAAEDS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccggcgagacaaatttgtaaggtttcaagattggagttcagatgatggatca
tttgcagagaaagttagaccatcattcaatgctgttatgggcggtctccggagaggattt
gagaaaggttttgaaaggattagaagcttgaagaaaccgataagctttcgttcttggggt
aataaaccaacaaaaaagagggcattgggttccaggaagagtattcttaatccacagggg
caatttcttcagaactggaataaaatatttctattatcctgtacaattgctctggccctg
gatcccttgtttttttacatccccgtgatggatggtaaacggaaatgccttaacttagat
gaaaaattggaaatcactgcttgcgtcctccgaacattcatggatgccttctatatactt
cacataatctttcaattccgcactgcgtttattgccccttcttctcgggtatttggtagg
ggtgagttgattgaggatcgttgggccatagcaaagaggtacttgtccaagaacttcatc
atcgatattctggcaattcttccattcccacagatggtgatcctaatcataattcccaca
ttaaaaggcccgatttcattggtcacgaaggagtggttgaaatacattattttctgccaa
tatgttccaagaatccttcgaattttccctctttacaaagaagttacaagaacttctggc
ttgcttactgaaacagcatgggccggagctgctttgaatctcttcctctacatgctagcc
agtcattttgttggcgccttgtggtacttgatctcaatagaacgagaagacaggtgctgg
cgcgatgctacccccagtggtgaaagagttgcattgtattgtgaagacaattcaccaata
aactacgacttagtaagattgctgaatacatcatgcccttttaccaaccctgatgacata
acggatccgaaggtcttcaacttcgggatattcatcgatgcacttgagtcaggtgtggtg
gaaacctgggattttccagaaaaattcttttactgcttttggtggggtttgcggaatcta
agttctctgggccaaaatctcaaaacaagcacttttgttggggagataatcttcgctatc
ttcatttccattgctggactgattctgttttcactgcttattggcaatatgcagaaatat
ctgcagtcgacaggagtcagaatagaggaaatgagagtgaaaaggcaagatgcagaacaa
tggatgtcccatcgaatgcttcctaagagcctgagggaacgtatcaggcgttacgaacag
tataaatggcaagaaaccagaggggttgtggaagagactctgattaataaccttcctaaa
gatctcaagagggatataaagaggcatctttgcttggctcttctcaagaaagtgccaatg
tttgagaaaatggatgagcgactattagatgcaatgtgtgatcgtctcaagctggcgctt
tacactgacaagagctacattgtccgtgagggggatcccgtagaggagatgctatttatc
atccgaggaaacctagtaagtacgaccaccaatggtggaagaactggcttcttcaatgct
gttcatctcaaggccggtgacttttgtggagatgatcttcttacctgggccttggatctc
cagtcctcttccaatctacctatctcgactagaaccgtgcaggccctgaaagaagtggaa
gcttttgctttaatggcagatgacttgaagtttgtggcctcccagtttcgacgccttcac
agcaagcagttccagcacactttcaagttctactcggtgcagtggcagacatgggcagca
tcttttattcaggcagcttggcgccggcactgcaagaggaagcttgttaagtccttacgt
gaagcagaggataagctgcaagatgctttggcaaaagagtctggaacctcgccaagcctt
ggtgccactctttatgcatcaaaatttgctgccaatgcattacgaaacttgaggcacagc
aattcacaaactaccagattgcctcaaagattaccaccgctactgcctcaaaagccggca
gagcctgattttgctgctgaagatagctaa
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