Theobroma cacao (cacao): 18614102
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Entry
18614102 CDS
T02994
Name
(RefSeq) RAB6A-GEF complex partner protein 1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18614102
Membrane trafficking [BR:
tcc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
18614102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
18614102
NCBI-ProteinID:
XP_017969284
UniProt:
A0AB32VUS3
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All DBs
Position
1:complement(34341404..34351293)
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AA seq
1122 aa
AA seq
DB search
MYMAYGYPQVIPLEQGQCPSSQNIIYLKVNNRLLLVVSPSHLELWSSSQHRVRLGKYKRD
ADSVQREGENLQAVWSPDSKLIAVLTSSFFLHIFKVQFTERKVQIGGKQPSNFYLATITC
VLIEQVPFAAKDLAVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELDSFQHNNSEVT
TLPHSLVNGITSGEAQGAFLSNYKVSRKSAIAQLEFCVPMRLLLVLYSDGQLVSCSVSKK
GLKLVESIKAEKSLGSGDAVCTSVAGDQQILAVGTRRGVVELYDLAESGSLIRTVSLYDW
GYSMDDTGSVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPVVKP
NQDCKYEPLMGGTSLMQWDEYGYRLYAIEEGSLERILAFSFGKCCLSRGVSGMTYVRQVI
YGEDRLLVVQSEDTDELKMLHLNLPVSYISQNWPVQHVAASKDGMYLAVAGLHGLILYDI
RLKKWRVFGDISQEQKIQCKGLLWLGKIVVVCNYIDSSNMYELLFYPRYHLDQSSLLCRK
PLLAKPMVMDVYEDYILVTYRRFDVHIFHVKLYGELTPSSTPDLQLSTVRELSIMTAKSH
PAAMRFIPDQIPREGALDNHISSSSNFLAREPARCLILRANGELSLLDLDDGRERELTDS
VELFWVTCGQSEEKTNLIEDVSWLDYGHRGMQVWYPSPGVDSFKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPTPQAQTILHCLLRHLIQRNKSEEALRL
AQISAEKPHFSHCLEWLLFTVFDAEISRQNVNKNKISVPKQNVSLLEKTCDLIRNFPEYL
DVVVSVARKTDGRHWADLFTAAGRSTELFEDCFQRRWYRTAACYILVIAKLEGPAVSQYC
ALRLLQATLDESLYELAGELVRFLLRSGRDYEQASTDSDRLSPRFLGYFLFRSSYRRSSL
DKSTSFKEQSAHVAPVKNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSAR
LENFASGLELIGQKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDLFR
HDMRLWKAYSLTLQSHPSFAEYHDLLDVLEEELSSVAHSEDK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatatccgcaggtgattccgttggagcaagggcagtgtccttcg
tcgcaaaatatcatttatctcaaagtcaataaccgactcttgctcgtcgtttcgccttcg
catctcgagctctggagctcctctcagcatagagtgaggttagggaagtataagagagat
gcggattcggtgcagcgagaaggcgagaatttgcaggccgtttggagccctgactccaaa
ttgattgccgttcttacatcatctttctttcttcacatcttcaaggtccagttcacagag
agaaaagtacaaataggagggaagcaaccttctaatttttatctggcaacgataacttgt
gttctgattgaacaagtcccgtttgcagcaaaggatttggctgtgagcaatattgtgagt
gataacaaacatatgctactagggctgtctgatggatctttatatagtatctcctggaag
ggggagttttatggagcttttgaactcgattcctttcaacataataacagtgaagttact
acattaccacattctctagttaatggtattacttctggagaagctcaaggagcttttctc
tccaattataaagtctccaggaagtctgctatagcccaactggagttttgtgttccaatg
aggctgctattagtcttatattctgacggacaactggtgtcatgctctgtgagcaagaaa
ggtttaaagctagttgaatccattaaagctgaaaaaagtttgggatccggtgatgctgta
tgtacttctgttgctggagatcaacagatccttgccgtaggtaccagaagaggagttgtt
gagttatatgacttggctgaatcggggtcgctcattcgtactgtctccttatatgactgg
ggatattcaatggatgacactggttctgttagttgtattgcatggacacctgataattct
gcttttgcagttgggtggaagttaagaggacttacagtttggtctgtttctggatgtcgt
ctaatgtcaaccatccgtcaaattggtttgagttctgtttcttctccagttgttaagcca
aaccaggattgtaaatatgaaccattgatgggtggtacctcactgatgcagtgggatgaa
tatggatataggctttatgctattgaggaaggatcgttggagagaattcttgcattttct
tttggaaagtgttgcctgagcagaggagtttcaggaatgacttatgtccgtcaagtgatt
tatggagaagataggttgcttgttgtgcagtcagaagatactgatgagcttaagatgcta
catctgaaccttccagtttcttatatctcccaaaattggcctgttcaacatgtggcagcg
agcaaggatggaatgtatttagccgttgctggtctccatgggctgattttatatgatata
cgactgaagaagtggcgagtgtttggagatatttctcaggaacaaaagattcaatgcaaa
ggtttgttatggctggggaagattgttgttgtctgcaactacattgattcttctaacatg
tatgagttgcttttctatccacggtatcaccttgatcaaagctctctactttgtcgtaaa
ccattgcttgcaaagccaatggtgatggacgtgtatgaagattatatactagtcacttat
cgccgttttgacgtgcacatattccatgtgaaattatatggtgaattgactccttcaagt
actccagacctacagctttctacagtacgagaactctcaatcatgactgcaaagagccat
cctgcagcgatgcgttttattcctgatcaaattccacgagagggtgcccttgacaatcat
atctcatcttcttcaaactttttagccagagagcctgcaagatgtctgatactgagagcg
aacggggagctttcactacttgatttggatgatgggcgggaaagggaactcactgattct
gttgaattattttgggttacatgtggtcaatcagaggagaaaacaaatctaattgaggat
gtctcttggttggattatggccaccgaggaatgcaggtttggtatccatctcctggtgtt
gactcatttaagcaggaggattttttgcagttggatccagagctggaatttgaccgtgag
gtgtaccctctggggcttcttccaaatgctggggttgttgttggtgtttctcaaagaatg
tccttttcagcatgcacagagtttccatgctttgagccaactccccaagctcaaactatt
ttacattgcctgcttcgacacctcattcagaggaacaaaagcgaggaagctttacggtta
gcacaaatatcagcagagaagccgcatttttcacattgtttggagtggcttctttttact
gtatttgatgctgagatttcaaggcaaaatgtgaataaaaacaagatctctgtcccaaaa
cagaatgtctctcttttggagaagacctgtgatctgattagaaattttccagagtatctt
gatgtggttgtgagtgttgcaagaaaaactgatggtagacattgggccgatttgttcact
gctgcaggaagatcaacagagttgtttgaagactgcttccagcggagatggtaccgcact
gcagcttgctacattcttgtaattgctaagcttgaaggtcctgctgttagtcagtattgt
gctctgcgcttattgcaggcaacactagacgaatcactgtatgaacttgctggagagctg
gtgaggttcttattgagatcagggagagattatgagcaggcatctacagattctgacaga
ctgtctcctagattcttgggctattttctttttcgttctagctacaggaggtcatcactt
gataaaagcacctcattcaaagagcagagtgctcatgtagctcctgtcaagaacatattg
gaaaatcatgctagctatttaatgtcgggaaaggaactttccaagcttgttgcatttgta
aaaggcactcagtttgatttagtggaatatcttcaacgagaaagatatggttctgctcgg
ttggagaactttgcttcagggcttgaactgattgggcaaaagctgcaaatgggtacattg
cagagcaggttggatgctgaattcctcttggctcatatgtgctcggtcaagttcaaggag
tggatagttgtcctagccacacttttaagacgatctgaggttctatttgatcttttccgg
catgatatgcggttgtggaaagcatatagtttgacattgcagtctcatccttcatttgct
gaataccatgatttgcttgacgttttggaagaggaactttcatctgtcgcacattcagaa
gataaatga
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