Theobroma cacao (cacao): 18614621
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Entry
18614621 CDS
T02994
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00040
Pentose and glucuronate interconversions
tcc01100
Metabolic pathways
Module
tcc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18614621
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
18614621
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
18614621
NCBI-ProteinID:
XP_017971745
UniProt:
A0AB32W2D1
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Position
1:complement(36982586..36985678)
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AA seq
458 aa
AA seq
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MFLKSHCLPLLITLISLSSCFGSYREDPFHNDFRQGHGYRPTTYHPYFRTFGVSNQGNYH
NPNSANLFNYNNEIRPRLARARAPVSSKVVNVDDFGAKANGRDDSQAFKKAWKYACSSSQ
GAVLVVPRNKIYRLKPIDFSGPCKSALVLKIYGTIKASVDHSDYQKHGRRWLYFNNVQNL
RVEGGGIINGNGRKWWEKSCKINKALPCKDAPTAVTFYECSNLKVAGLRIKNAQQMHLTF
QKCVNVKVFNLFVTAPGNSPNTDGIHVTETQNISIKNCVIRTGDDCISIVSGSKLVRATG
ITCGPGHGISIGSLGAGNSAAYVSDVIVNKAKLSGTTNGVRIKTWQGGSGYAKNIKFQNI
VMHNVSNPIIIDQNYCDQRNPCSKQVSAVQVSNVLYQNIRGTSASNVAVKFDCSKSFPCR
GIFLQNVALAAQEEDIAEASCSNVRLSYQGKVSPPCTT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttcctaaaaagccattgtctcccacttctcattacattaatctctttgtcctcctgt
tttggcagttacagagaggacccatttcacaatgattttcgtcaaggccatggttatcgc
ccaacaacatatcatccatattttcgtacttttggcgtttccaaccaaggaaactaccat
aatcccaactctgcaaatctgttcaactataataatgagattaggcctaggcttgccaga
gcgcgtgctccggtgtcttcaaaggtagtgaatgtagatgattttggagctaaagctaat
ggaagagacgattcccaggcatttaagaaagcttggaagtatgcttgttcttcttctcaa
ggagctgttctggtggttcctaggaacaagatttatcgtcttaagccaattgatttctca
ggaccttgcaaatctgctcttgtgttgaagatctatggaacaatcaaagcctccgttgat
cactctgattaccaaaaacatgggagacgatggctttactttaataatgttcaaaattta
agagtagaaggtggaggcatcatcaatgggaatggcagaaaatggtgggaaaagtcctgc
aagatcaacaaagccctcccttgcaaggatgcaccaacagctgtaaccttctatgaatgc
agtaacctgaaagtggcaggactgcggataaaaaatgcacagcaaatgcatcttacattt
caaaaatgtgtcaatgtgaaagtctttaatcttttcgtgaccgcacctggaaacagcccc
aacaccgatggaatccatgtcactgaaacccagaatattagcatcaagaactgtgtcatc
aggacaggtgatgactgcatctccatagtgagcggctccaaacttgtccgcgccacgggt
ataacttgtggaccgggccatggaatcagcattggcagcttaggagctggaaattctgca
gcttatgtgtccgatgtaatagtgaataaagcaaaactttcaggaaccaccaacggagtg
agaataaagacttggcagggaggatcagggtatgccaagaacatcaaattccaaaatatt
gtgatgcacaacgtcagcaatcccataattatcgatcaaaactattgtgatcaacgaaat
ccatgctccaaacaggtgtcagctgtgcaagtgagcaacgtgctttaccaaaacatcaga
ggaaccagtgcctctaacgtggcagtgaaattcgattgcagcaagagctttccttgccga
ggcattttcttgcaaaatgtggctttagcagcacaagaagaagatattgcagaggcttcg
tgttctaacgttagattatcttaccaggggaaagtttctccaccttgcacaacctga
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