Theobroma cacao (cacao): 9978151 Help Entry 9978151           CDS       T02994                                  Symbol rpoA, ThcaC_p053 Name (RefSeq) RNA polymerase alpha subunit   KO K03040   DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Organism tcc  Theobroma cacao (cacao) Pathway tcc03020   RNA polymerase Brite KEGG Orthology (KO) [BR:tcc00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     9978151 (rpoA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tcc03021]     9978151 (rpoA)    03400 DNA repair and recombination proteins [BR:tcc03400]     9978151 (rpoA) Enzymes [BR:tcc01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      9978151 (rpoA) Transcription machinery [BR:tcc03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      9978151 (rpoA) DNA repair and recombination proteins [BR:tcc03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       9978151 (rpoA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD HHH_XRCC3_RpoA RNA_pol_L_2 Motif Other DBs NCBI-GeneID:  9978151 NCBI-ProteinID:  YP_004021348 UniProt:  E3VU19 A0AB32X139 LinkDB All DBs Position Pltd:complement(83034..84017) Genome browser AA seq 327 aa AA seqDB search MVREKVKVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRNAFICAKGPGYVTAQD IILPPSVEIVDNTQHIASLTEPIDLCIGLQIERNRGYRIKTPNNFHDGSYPLDAVFMPVR NANHSIHCYGNDNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE NNQHNVTLPFFPFHDRLAKLRKKKKEIALKYIFIDQSELPPRIYNCLKKSNIHTLLDLLN NSQEDLMKIEHFRIEDVKQILGILEKE NT seq 984 nt NT seq  +upstreamnt  +downstreamnt atggttcgagagaaagtaaaagtctctactcggacactacagtggaagtgtgttgaatca agaacagatagtaagcgtctttattatggacgctttattctgtctccacttatgaaaggt caagccgacacaataggcattgcaatgcgaagagctttgcttggagaaatagaaggaaca tgtattacacgtgcaaaatctgagaaaataccacacgaatattctaccatagtaggtatt caagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatttg tatggaactcgtaacgcctttatttgtgccaagggtcccggatatgtaactgctcaagac atcatcttaccaccttctgtggaaatcgttgataatacacagcatatagctagcctaact gaaccaatcgatttgtgtattggattacaaatcgagagaaatagaggataccgtataaaa acgccaaataactttcacgacggaagttatcctctagatgctgtattcatgcctgttcga aatgcgaatcatagtattcattgttatgggaatgataatgaaaaacaggagatacttttt ctagaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaagcctctcgg aatttgattgatttatttattccttttctacatgcggaagaagaaaacttacatttagaa aacaatcaacacaacgttactttacctttttttccttttcatgatagattagctaaacta agaaaaaaaaaaaaagaaatagcattgaaatatatttttattgaccaatcagaattgccg cctaggatctataattgtctcaaaaagtccaatatacatacattattggaccttttgaat aacagtcaagaagaccttatgaaaattgaacattttcgcatagaagatgtaaaacaaata ttgggcattctagaaaaggagtag

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