Thermohahella caldifontis: AAIA72_01680
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Entry
AAIA72_01680 CDS
T11202
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tcd Thermohahella caldifontis
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcd03009
]
AAIA72_01680 (rimO)
Enzymes [BR:
tcd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AAIA72_01680 (rimO)
Ribosome biogenesis [BR:
tcd03009
]
Prokaryotic type
ribosomal protein modification factors
AAIA72_01680 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
XDT72721
UniProt:
A0AB39UY71
LinkDB
All DBs
Position
351225..352544
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AA seq
439 aa
AA seq
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MSGSRSPRIGMVSLGCPKNSVDSERILTQLRAEGYELTGSYEDAELVIVNTCGFIDAAVE
ESLEAIGEALAENGKVLVTGCLGVKEDTIREIHPGVLAVTGPHAYEAVMEQVHAHVPPAH
DPFMDLVPPQGVRLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEVLDEAERLV
QSGVKELLVISQDTSAYGVDLRYRTGFWQGRPVKTRMLDLCRELGKLGAWVRLHYVYPYP
HVDDVIPLMAEGLILPYLDIPFQHASPEVLKRMKRPAHTENTLARIRAWREVCPDITLRS
TFIVGFPGETEADFQMLLDFLEEARLDRVGCFAYSDVEGAAANALPDQVPEEVKQERLAR
FMEVQQRISAEKLADKIGREMSVLVDGADEDGLVARSPADAPEIDGNVYVEGFFDARPGD
LITVRIVDSGDYDLFAEVV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatcgcgcagtccgcgtatcggaatggtcagtctgggatgtccgaagaattcc
gtggattcggagcggatactgacccagctgcgtgctgaaggttacgaactcaccggcagc
tatgaggatgcggagctggtcatcgtcaatacctgtggctttattgatgcggcggttgag
gagtcactggaggccatcggggaggcgctggccgaaaacggcaaggtgctggtgacgggc
tgcctgggcgtcaaggaagataccattcgtgaaatccacccgggtgtgctggccgtgacc
ggtccgcatgcctacgaggcggtgatggagcaggtgcatgcccatgtgccgcccgcgcat
gatccgttcatggacctggtgccgccccagggtgtccgcctcacaccgaggcattatgcc
tacctgaaaatctcggaaggctgcaatcaccgctgcacattctgcattatcccgtccatg
cgcggggacctggtgagccgtcccgtgggtgaagtgctggacgaggcggagcgtctggtg
cagagcggcgtgaaggaactgctggtcatctctcaggataccagcgcctacggtgtggac
ctgaggtaccgcacgggattctggcagggcaggccggtgaagacccggatgctggatctg
tgccgtgaactcggcaagctgggagcctgggtgcggctgcattacgtgtatccctatccg
cacgtggatgatgtgattccgctcatggctgaaggcctgatcctgccctatctggacatc
cccttccagcatgccagcccagaagtcctgaaacgcatgaaacgtccggcccatacggaa
aacacgctggcccgcatccgtgcctggcgcgaggtgtgcccggatatcacgttgcgttcg
accttcattgtcggattcccgggcgaaaccgaagcggattttcagatgctgctcgatttt
ctggaggaggcccggctggatcgggtgggctgctttgcctactcggatgtggagggcgcg
gccgccaatgcattgccggatcaggtgcccgaggaggtcaagcaggagcggctggcccgt
ttcatggaagttcagcagcgcatcagtgcggagaaacttgctgacaagatcggcagggag
atgagcgtgctggtggatggtgccgatgaggatgggctggttgcacgcagtcctgcggat
gcaccggaaattgacggcaatgtttacgtggaaggtttcttcgatgcccgcccgggtgat
ctgattaccgtcaggatcgttgattccggcgattacgacctgtttgccgaggtggtttaa
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