Thermohahella caldifontis: AAIA72_01730
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Entry
AAIA72_01730 CDS
T11202
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
tcd Thermohahella caldifontis
Pathway
tcd02020
Two-component system
tcd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AAIA72_01730
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AAIA72_01730
02025 Biofilm formation - Pseudomonas aeruginosa
AAIA72_01730
09142 Cell motility
02040 Flagellar assembly
AAIA72_01730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcd03000
]
AAIA72_01730
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tcd02035
]
AAIA72_01730
Transcription factors [BR:
tcd03000
]
Prokaryotic type
Helix-turn-helix
Other families
AAIA72_01730
Bacterial motility proteins [BR:
tcd02035
]
Flagellar system
Flagellar assembly proteins
Others
AAIA72_01730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
FleQ
HTH_8
AAA_5
HTH_50
AAA_7
AAA_16
nSTAND3
HTH_30
AAA_22
AAA
Response_reg
ATPase
SLFN-g3_helicase
bpMoxR
AAA_2
Motif
Other DBs
NCBI-ProteinID:
XDT72731
UniProt:
A0AB39UWS8
LinkDB
All DBs
Position
360899..362338
Genome browser
AA seq
479 aa
AA seq
DB search
MTNEDVILVVSDDPVIRQELETIIRFLDEPVIAVSTQDWQSAAGESIANGGLRCMILDAD
GPTEIIPALRAMDASVPVLLLGDTNVDDLDEEDRRRIIARLQRPLSYTKFNDSLYRAQIF
REHHSQDRVRAQQRELQLFRSLVGTSRAICRVRELMAQVADKEVSVLITGESGTGKEVVA
RNLHYNSHRRNKPFVPVNCGAIPAELLESELFGHEKGAFTGAISTRVGRFELAQGGTLFL
DEIGDMPLHMQVKILRVLQERTFERVGSNKTQQADVRIIAATHKNLEEMIEKGEFREDLY
YRLNVFPIEMPALRERVEDIPLLLNELVSRMEKEKRGSLRFNSAAILSLCRHDWPGNVRE
LANLVERLAIMHPYGVIGVHELPPKFRHVDDLDEERPEALEALKQQGVPGGLPGLDAPAM
LPVNGLDLKEYLANLEKTLIRQALEDAGGVVARAAEKLHIRRTTLVEKLKKYQITADAD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgaagatgtaatattggtcgttagtgatgatccggtgattcgtcaggagctg
gagaccatcattcgttttctggatgagccggtgattgctgtatccacgcaggattggcag
tccgctgccggcgagagtatcgccaacggtggtctccggtgcatgattctggatgccgat
gggccgacagagatcatcccggctttgcgtgccatggatgccagtgtgccggtgctgttg
ctgggcgacacgaatgtggatgacctggatgaagaggatcgcaggcgtatcattgcccgg
ttgcagcgcccgctgagttacacgaaattcaacgacagtctctaccgggctcagattttc
agggaacatcacagccaggaccgggtgcgtgcccaacagcgggagttgcagctgttccgt
tctctcgtcggaaccagccgagccatttgccgggtccgggagctgatggcccaggttgcg
gacaaggaagtgagcgttctcattaccggtgagtccggcacgggcaaggaggtggtcgcc
cggaaccttcactacaattcccatcgccgcaacaagccgttcgtgccggtgaactgtggc
gccatcccggccgagttgctggaaagtgagctgttcggccatgagaagggggcctttacc
ggtgccatttccacgcgggtcgggcgctttgagctggcacagggcggcacgctgttcctg
gacgaaatcggagacatgccgctacacatgcaggtgaaaattcttcgtgtcctgcaggag
cgaacctttgagcgtgtcggcagcaacaagacccagcaggcggatgtccggatcattgca
gcgacgcacaagaatctggaagagatgattgagaagggagagttccgggaggacctctac
tatcgcctgaatgtgtttcccatcgaaatgccggcgctgcgtgaacgggttgaggatatt
ccgcttctgctcaacgagctggtgagccgcatggaaaaggaaaagcggggttcgctgcgc
ttcaattcagccgccattctgagcctgtgccgtcacgactggccgggcaacgtccgcgag
ctggcgaacctggtggagcgtctggccatcatgcacccctatggtgtgatcggcgtgcat
gaactgccgccgaagttccgccatgtggatgatctggatgaagaacgccccgaggccctt
gaggcgctgaaacagcagggtgtgccgggtggcttgccgggtctggatgcgccggcgatg
ctgcccgtgaacggtctggatctcaaggagtacctggccaaccttgagaaaacactgatc
cggcaggcgctggaggatgccggaggggtcgtggcacgtgccgccgaaaagctccacatc
cggcgaacgacgctggtggaaaagctcaagaaatatcagatcacggcagacgccgactga
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