Thermohahella caldifontis: AAIA72_03235
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Entry
AAIA72_03235 CDS
T11202
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tcd Thermohahella caldifontis
Pathway
tcd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAIA72_03235 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcd03400
]
AAIA72_03235 (xthA)
Enzymes [BR:
tcd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AAIA72_03235 (xthA)
DNA repair and recombination proteins [BR:
tcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AAIA72_03235 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-ProteinID:
XDT73015
UniProt:
A0AB39UXU5
LinkDB
All DBs
Position
complement(671975..672796)
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AA seq
273 aa
AA seq
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MRVVSFNVNGLRARIHQMQALVERYQPDVIGLQETKVDDSEFPVEAMRDLGYEVAWHGQK
GHYGVALLSRFPMDEVTTRLEGNDDDDHCRFIRARVQVGDTPVWVLNGYFPQGENRDHPV
KFPHKRDFYARLLALLKSRFSPDEPLVLMGDMNISPEDKDIGIGEDNRKRWLRTGKTSFL
PEEREWLQQLKDWGLQDTFRIIHPDADDQFSWFDYRSRGFERDPKRGLRIDLILATPPLA
RTCTDAGIALDIRAMERPSDHSPVWADFDLPSN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtatcattcaatgtcaacggactcagggcccgaatccatcagatgcaggca
ctggtagagcgttaccagcccgatgtgatcggcctccaggaaaccaaggtggatgacagc
gaattccctgtcgaagccatgcgggatcttggctacgaggtggcgtggcacggacagaaa
ggccattacggcgttgccctgctctcgcggtttcccatggatgaggtcaccactcggctg
gaaggcaatgatgacgatgatcactgtcgcttcatccgcgcccgggttcaggttggtgac
actccggtgtgggtgctgaacggttactttcctcagggagagaaccgggatcatcccgtc
aagtttccgcacaagcgtgatttttacgcacggctgctcgcccttctcaaaagccgcttt
tctccggatgaaccccttgttctcatgggagacatgaacatctctccggaggacaaggat
atcggcatcggggaagacaaccgcaagcgctggctgcgaacgggcaagaccagcttcctg
ccggaggagcgcgaatggttgcagcagctcaaggattggggattgcaggataccttccgc
atcattcatccggatgcggatgatcagttcagctggtttgactatcgcagccgtggtttc
gaacgcgaccccaaacgtggtctgcgcatcgacctgattctggccacgccgccactggcc
agaacatgcactgatgcgggcattgcgctggatattcgtgccatggaacgtccaagcgat
cacagtcctgtatgggcggattttgatttgccgtcaaactag
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