Thermohahella caldifontis: AAIA72_03870
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Entry
AAIA72_03870 CDS
T11202
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tcd Thermohahella caldifontis
Pathway
tcd03030
DNA replication
tcd03430
Mismatch repair
tcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAIA72_03870 (dnaX)
03430 Mismatch repair
AAIA72_03870 (dnaX)
03440 Homologous recombination
AAIA72_03870 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcd03032
]
AAIA72_03870 (dnaX)
03400 DNA repair and recombination proteins [BR:
tcd03400
]
AAIA72_03870 (dnaX)
Enzymes [BR:
tcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAIA72_03870 (dnaX)
DNA replication proteins [BR:
tcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAIA72_03870 (dnaX)
DNA repair and recombination proteins [BR:
tcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAIA72_03870 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_30
nSTAND3
AAA_19
TsaE
AAA_18
AAA_28
DUF3646
PIF1
Mg_chelatase
TniB
Motif
Other DBs
NCBI-ProteinID:
XDT73127
LinkDB
All DBs
Position
complement(800217..802271)
Genome browser
AA seq
684 aa
AA seq
DB search
MSYQVLARKWRPGKFEEMVGQEHVLRALANALDQNRLHHAYLFTGTRGVGKTTLARIFAK
CVNCETGISATPCGTCQTCEEIASGRFVDLIEIDAASHTGVSEIREILDNVQYAPTRGRF
KIYLIDEVHMLSNSSFNALLKTLEEPPPHIKFLLATTDPQKLPITVLSRCLQFNLKNLPE
KRIVSHLAHVLDAEGIPHETEALWEIARSADGSMRDALSLTDQAIAFGQGEVRTADVIDM
LGTVDRQVGRKLLASVIGRRREDALKLCHEIAQRSPDWSHLLEGMAELAHRIAMEQTVSG
IVDDALGDQDFVREMARNASPEHIQLIYQIALAGLRDMPYAPTPRIGFEMSLIRMLAFTP
LCPTGIIGGEGSEAASNDSGTGSEPAVSGQPAAPGDTEAVSQMASVSREEFSPDAGTPDT
SRAPATAERTNDESPVSSQAASPQRDTVPEAVEDAAEDTAASPDASLDMSAPAIPEPAPA
VADPADPDAWRNEVSQDDGTTAETVVEPSEPTVAAMSMSAATSTPSGGAVQSDTVCQPAA
TMPAAQEMDDLTRFWLDLYGRLPLKGMLASLCKRLALVRKEGDTWYFLIDPEHGDFFTAL
HRERLAGALSEVTGSSCQVDVAVETHNLMTPQAHEDIRAAERQAEAERIILQDPCVRTLI
ETFDGTLIPGSIRPDTATGETSHV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgccagaaagtggcgtcccggaaaattcgaagaaatggtgggg
caggagcacgtgttgcgtgcgctggccaatgcactggaccagaacaggcttcaccacgca
tacctgtttaccggcacccggggagtgggcaagaccacgctcgcccgtatttttgccaag
tgcgtcaactgcgaaacgggcatttcggcaaccccctgcggcacctgccagacctgtgag
gagattgcctccggacgctttgtggatctgatcgaaatagacgcagcgtcccatactggc
gtctccgagatccgcgagattcttgacaatgtgcaatacgcacccacacgcgggcgcttc
aagatttatctgatcgacgaggtacacatgctgtccaactcgtcgttcaatgcgttgctc
aagactctggaggagccgcctccgcacatcaagtttctgctggccacgacggatccccag
aagctgccgatcaccgttctgtcccggtgccttcagttcaatctcaagaatctgccggaa
aagcgcattgtgagtcatctggcccacgtgctggacgcagaaggcattcctcatgaaacg
gaggcactttgggaaattgcccggagtgcggatggcagcatgcgcgatgcgctgagtctc
acggatcaggccattgccttcggccagggcgaggtgcgcactgccgacgtgattgacatg
ctgggcacggttgaccggcaggtgggccgcaagctgctggcgtccgttatcgggaggcgt
cgtgaagacgccctgaaactgtgtcatgagatcgcacaacggtcaccggactggtcccac
ctgctggagggcatggccgagctggcgcaccgtattgccatggagcagacggtgagcggt
attgtcgatgatgccttgggggatcaggactttgtccgggaaatggcccgcaatgcttca
cccgaacacatccagctgatttaccagattgcgctggccggtctgcgggacatgccctac
gcacccacgccgcggatcggttttgaaatgtcactgattcgcatgctcgcgtttacgccc
ttgtgtccgaccgggattatcggtggcgagggttcagaagcggcttccaatgactccggc
acaggcagtgagccggcggtttccggtcagccggccgcacccggtgacacggaagccgtc
tcacagatggcctcggtatcccgggaagaattcagtccggatgccggaactcccgacaca
agccgcgcacccgcgacggctgaacggacaaacgacgaatccccggtatcctctcaggcc
gcttcaccacagcgtgacacggtcccggaagcggtggaagatgccgctgaggatacggct
gcttcgccggatgcttcattggacatgagcgcccctgcgattccggagcccgcgcctgct
gttgcggacccggctgaccctgatgcctggcgcaatgaagtcagtcaggatgatggaacc
acggcagaaaccgttgtcgagccttctgaaccgactgtcgcggccatgtccatgtccgcg
gccacgtccacgccctccgggggggcggtgcaatctgatactgtctgccagccggcggct
actatgcctgccgctcaggagatggatgacctgacgcggttctggctggacctttacggc
aggctgcctctcaaaggcatgctggcaagtctgtgcaaacgactggcgctggtgcggaag
gagggggatacctggtacttcctcattgaccccgagcatggtgacttttttaccgccttg
catcgtgagcgtctggctggcgcgctgtcggaggtgaccggatcgtcctgccaggtggac
gtggccgttgaaacccacaacctgatgacacctcaagcgcatgaggatatccgggccgcc
gaacgccaggccgaggcggagcgtatcattctccaggatccctgtgtccgcaccctcatt
gaaacctttgatggtaccctgattccgggtagcatccgacccgataccgctacaggagag
acttcgcatgtttga
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