Thermohahella caldifontis: AAIA72_07895
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Entry
AAIA72_07895 CDS
T11202
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
tcd Thermohahella caldifontis
Pathway
tcd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AAIA72_07895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tcd02022
]
AAIA72_07895
02035 Bacterial motility proteins [BR:
tcd02035
]
AAIA72_07895
Two-component system [BR:
tcd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
AAIA72_07895
Bacterial motility proteins [BR:
tcd02035
]
Pilus system
Twitching motility proteins
AAIA72_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_19
HTH_30
HTH_50
VpsR
FleQ
AAA_5
AAA_16
HTH_28
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XDT73881
UniProt:
A0AB39V1B2
LinkDB
All DBs
Position
1613996..1615360
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AA seq
454 aa
AA seq
DB search
MAQNILIVDDEPDIRDLLEITLIRMGHQTQTAENLRAARDALDTHTFDLCLTDMNLPDGN
GIDLVRHIQKHHPNTPVAVITAYGSVDAAIAALKAGAFDFVSKPVELSRLRELVTTALKL
SAGKTDNRDLKRELLGTSPAMSTLRRQIRKLARSQAPIYISGESGSGKELVARMIHSQGP
RADGPFIPVNCGAIPSELMESEFFGHRKGAFTGATDNKTGLFQAANGGTLFLDEVADLPL
PMQVKLLRAIQEKAVRPVGDEQEYPVDVRILAATHKNLQNEVAEGRFRQDLFYRINVIEL
KVPPLRERKEDIPLLARHILDKLSAECDLPPMGISQAALDKLLAYSFPGNVRELENILER
AFTLCEGEEIGPDDLALEPAPAGTATDDSGHSQVLGATPEIPVNLNLEDFLESIEKQAIE
KALEETRWNKTAAAKKLGISFRALRYRLKKLGME
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaacatcctgattgttgacgacgaaccggatatccgcgacctgctcgaaatc
accctgatccgcatggggcatcagacgcaaaccgcagaaaacctccgggctgcacgggac
gctctggatacgcacacctttgacctgtgcctgaccgacatgaatctgcccgacggcaac
ggcatcgatctggtgcgccacatccagaaacaccatcccaacacgccggttgccgtgatc
accgcctatggcagtgtggacgcggcgattgccgcactcaaggccggcgccttcgacttc
gtgtccaagccggtcgagctgtcgcgcctgcgcgaactggtcaccaccgcgctcaagctg
agtgcaggcaagacggataaccgggacctcaagcgcgagctgctgggcacctcgccggcc
atgtccaccctgcgccgccagatccgcaagctggcacggagtcaggcccccatctacatc
agcggggaatcgggcagtggcaaggagctggttgcccgcatgattcacagtcagggcccg
cgtgcggacgggccgttcatccctgtcaactgcggtgccattccttccgaactgatggaa
agcgaattcttcggccaccgcaagggcgccttcaccggggccacggacaacaagaccggc
ctctttcaggctgccaatggcggtaccctgtttctggatgaagtggccgatctgccgctg
cccatgcaggtcaagctcctgcgcgccattcaggaaaaggccgtccgcccggtgggtgat
gagcaggaatatcccgtggatgtgcggattctcgccgccactcacaagaatctgcagaac
gaagtggccgagggacgtttccgccaggatctgttctaccgcatcaacgtgattgagctg
aaggtaccgccgctgcgcgaacgcaaggaagacatccccctgctggcacgccacattctg
gacaaactgtccgccgagtgcgacctgccgcccatgggcatttcccaagctgccctggac
aaactgctcgcctacagcttcccgggcaacgtgcgcgaactggagaacatcctcgaacgc
gccttcacgctctgcgaaggcgaagaaatcggcccggacgacctggcgctggaacctgct
cctgccggcacggcaacggacgactccggacacagccaggtactcggtgccacaccggaa
attcccgtcaacctcaatctcgaggattttctggaatccatcgagaaacaggccatcgag
aaagcgctggaagagacgcgctggaacaagaccgccgcagccaaaaagctgggaatcagc
tttcgagccctgcgctaccgcctcaagaagctgggcatggagtga
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