Thermohahella caldifontis: AAIA72_09890
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Entry
AAIA72_09890 CDS
T11202
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tcd Thermohahella caldifontis
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcd03400
]
AAIA72_09890 (phrB)
Enzymes [BR:
tcd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AAIA72_09890 (phrB)
DNA repair and recombination proteins [BR:
tcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AAIA72_09890 (phrB)
Prokaryotic type
AAIA72_09890 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XDT71117
UniProt:
A0AB39UT50
LinkDB
All DBs
Position
complement(2051189..2052634)
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AA seq
481 aa
AA seq
DB search
MIGVWFRRDLRVADHPALSRAVAQARASGTGVRAVFVATPETWARHDRSPAWRRLVAARV
QVLHGLLARAGVVLDHVVVPTFAEVPEVLESWCRTHQVDALWAHHEYEVDEVARDEAVAR
RLSIPFTRLHDRVLVVPGQVHTQQGDMFRVYTPFRRRWLQALQKNWQGVLPVPQAGPPLA
ETALPWPDWAPAEDAPVWPAEEDAIHARLERFVAQSLFNYAEQRDRPDLDGTSQVSPWLA
IGALSPRQCVAALLEACPDALVNPASPGFSWLNELGWRDFYQHLIVAFPQLVRGQPFQAW
THAVAWRDAPRELDAWQAGRTGFPIVDAGMRQLAATGWMHNRVRMIVASFLTKDLLIHWQ
AGERHFMRHLVDGDFAANNGGWQWAASTGTDAQPYFRVFNPITQGQRYDPAGDYVRRWVP
ELARVPGKHVHTPHTWAQARGVQLDYPRPIVDHGAARLRALQAFEAAKSGRTPEPRQLEG
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgtgtggttccggcgtgatctgcgggtggctgaccatcccgccctgagccgt
gccgtggcgcaggcccgcgcatcgggtactggtgtgcgcgccgtgtttgtggccacgccc
gagacctgggcgcggcatgaccgcagcccggcatggcgacgtctggttgccgcccgcgtg
caggttctgcacgggcttctggcgcgtgcgggggtggtgctcgatcatgtggtggtgccc
acgtttgcggaggtgcccgaggtgctggaatcatggtgtcgcacccatcaggtggacgct
ctctgggcccatcacgagtatgaagtggatgaggtcgcccgggatgaggccgtggcccgt
cgtctgtcgatccctttcacacgtctgcatgaccgcgtgctggtggtaccggggcaggtg
cacactcagcagggcgacatgttcagggtgtacacgccgttccggcgccgctggttgcag
gcgttgcagaaaaactggcagggcgtgttgccggtgccgcaggctggcccgccgctggcg
gaaacggcgctgccctggccggactgggcccctgcagaggacgcgccggtgtggccggcg
gaagaggacgccattcatgcgcggctggagcggtttgtggcgcagtcgctattcaactat
gcggagcagcgtgaccgcccggatctggacggcaccagtcaggtctcaccctggctggcc
atcggtgccctgtcgccccgccagtgtgtggcggccttgctggaggcctgtccggatgcg
ctggtcaatcccgcttcacccggcttcagctggctgaatgagctgggatggcgtgatttc
taccagcacctgatcgtggcctttccacaactggttcgcgggcagccctttcaggcatgg
acacacgccgtggcatggcgggatgcgccccgggaactcgatgcctggcaggcgggccgc
accggctttcccattgttgatgccgggatgcgtcagctggcggccaccggatggatgcac
aaccgggtgcgcatgatcgtggcgagctttctgaccaaggatctgctcattcactggcag
gccggggagcggcatttcatgcgtcacctcgtggacggggatttcgccgccaacaacggg
ggctggcaatgggccgcctccacggggaccgacgcgcagccctacttccgggtgttcaac
ccgatcacacaagggcagcgttacgatccggcaggcgattacgtcaggcggtgggtgccg
gagcttgcccgcgtgccgggcaagcacgttcatacgccccatacctgggcgcaggcgcgg
ggcgtgcagctggattacccccggccgatcgtggatcacggtgctgcgcgtctgagagca
ttgcaggcattcgaagcggccaaatccggccggacacctgaaccgaggcaactggagggc
atctga
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