Thermohahella caldifontis: AAIA72_09990
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Entry
AAIA72_09990 CDS
T11202
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tcd Thermohahella caldifontis
Pathway
tcd03030
DNA replication
tcd03410
Base excision repair
tcd03420
Nucleotide excision repair
tcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAIA72_09990 (polA)
03410 Base excision repair
AAIA72_09990 (polA)
03420 Nucleotide excision repair
AAIA72_09990 (polA)
03440 Homologous recombination
AAIA72_09990 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcd03032
]
AAIA72_09990 (polA)
03400 DNA repair and recombination proteins [BR:
tcd03400
]
AAIA72_09990 (polA)
Enzymes [BR:
tcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAIA72_09990 (polA)
DNA replication proteins [BR:
tcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AAIA72_09990 (polA)
DNA repair and recombination proteins [BR:
tcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AAIA72_09990 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAIA72_09990 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XDT71136
UniProt:
A0AB39UT33
LinkDB
All DBs
Position
2068362..2071112
Genome browser
AA seq
916 aa
AA seq
DB search
MSGDTQAPDLILVDGSSYLFRAFHALPDLTTSDGRHTGAIRGVISMIRKMQNDYPSSRII
MVFDAKGKTFRHDLYADYKAHRPPMPEELASQIEPIHAIIRAMGLPLVVIDGVEADDVIG
TLARRASDRGLTTLISTGDKDMAQLVTPSVTLLNTMTGERLDEPAVEAKFGVRPDQIIDF
LALTGDTADNIPGVPKCGPKTAAKWLGQYGTLDNLIAHADEIKGKIGENLRAALDQLPLS
RQLATIHTDVALPVDLDDLQPEPPDTEALKALFADLEFRSWLRELENPQDPDHSSGTAAN
DPGTEAPDTSGQLSSEGYRILTTESGLTALIDELKAAGEWVFDTETTSLSSMAARIVGLS
FCTRPGHAVYLPLCHDYPGAPDQLPPETTLTALKPLFEDAGQRKIGQNLKYDAHVLANHG
ITLRGIHDDTMLESYVLDPAGSRHDMDTLSLKYLQHKTVSFQDIAGKGKGQLTFNQVDVE
TAGHYAAEDADVTLRLHQALAPRLDAEPALKRVYREIEMPLVPVLLRMERNGALVDARVL
REQSQMLAARMAELEKKAWELAGEPFNLGSTKQLQQIFYDKLGYEVLKKTPKGQPSTAEP
VLQELAEKYELPAIILEHRSLSKLKSTYTDKLPEQIWPATGRIHTSYHQAVTATGRLSSS
DPNLQNIPVRTEEGRRIRQAFIAPPGKLLISADYSQIELRIMAHLSGDEGLIRAFREGRD
IHSATAAEVFGVPLEDVTSEQRRRAKAINFGLIYGMSAFGLARQIKVSREEAGHYIDTYF
ARYPGVRDYMERIRQQARDQGYVETLFGRRLYLPDIHSRNRMRQQAAERAAINAPMQGTA
ADIIKRAMIAVHHWLEAEQVPAMMILQVHDELILEAEASAAEAVAERLKQLMSAAAELAV
PLQVDAGIGHNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacacccaagcccccgatctgatcctggtggacggctcatcctacctgttc
cgggccttccatgccctgcccgatctgaccacctccgacggccggcatacgggtgccatc
cgcggtgtcatcagcatgatccgcaagatgcagaacgattacccctcaagccggattatc
atggttttcgatgccaagggcaaaactttccggcacgatctgtatgcggactacaaggca
caccgcccgcccatgccggaagaactggccagccagatcgaacccatccacgccatcatc
cgcgccatgggattgccgctggtggtcattgacggcgtggaagcggatgacgtcatcggc
accctggcgcgccgcgccagcgatcgcgggctgaccacgctgatttcaaccggggacaag
gacatggcccagttggtcactcccagcgtgaccctgctcaacaccatgaccggagagcgg
ctggacgaaccggcggtggaagcaaagttcggcgtcagaccggatcagatcatcgacttt
ctcgccctcaccggcgacacggcggacaacatccccggcgtgcccaagtgcggccccaag
acggccgccaaatggctcggccagtacggcacgctggacaatctgatcgctcatgcggac
gagatcaagggcaagattggcgagaatctgcgggcggcactggatcagctgcccctctcg
cgccagctggctaccattcatacggatgtggcgctgcccgtggatctggatgacctgcag
ccggagccgccggatacggaggcactcaaggcactctttgcggacctggagttcagaagc
tggctgcgtgaactggaaaacccgcaggatcctgaccactcttcgggtaccgccgccaac
gatccggggaccgaagcgccggatacctccggccagctgagcagcgaaggctaccggatt
ctcacgaccgaatccggcctcacagccctcattgacgagctgaaggccgcgggtgaatgg
gtgttcgatacggaaaccaccagcctcagcagcatggcggcacggattgtcgggctgtcc
ttctgcacccgccccggccacgccgtatatcttccgctctgccacgactacccgggcgcg
ccggatcaactgcctccggaaaccacgctgacggccctgaagcccctgttcgaggatgcc
ggacagcgcaagatcggacagaacctcaagtacgatgcccacgtgctggccaaccacggc
attaccctgcggggcatccatgatgacaccatgctggaatcctatgtgctggatcccgcc
ggcagccgccatgacatggacaccctgtccctgaagtacctgcagcacaagaccgtcagc
tttcaggacatcgccggcaagggcaagggtcagctcaccttcaatcaggtggatgtggag
accgcgggccattatgccgcagaggatgcggacgtcaccctgcgtctgcaccaggcgctc
gctccccgtctggacgcggaacccgccctgaagcgggtttaccgggaaatcgagatgccg
ctggtgccggtgctgctgcgcatggagcgcaacggtgccctggtggatgcccgggtgctc
cgcgaacagagtcagatgctggccgcacgcatggccgagctggaaaagaaggcctgggag
ctggccggagagccgttcaatctgggttccaccaagcagctccagcagattttctacgac
aagctggggtatgaggtgctgaagaagacgcccaagggacagccttccaccgccgagccg
gttcttcaggaactggcggaaaagtacgagctgccggccatcattctcgagcatcgcagt
ctgtccaagctcaagagcacctatacggacaagctgccggagcagatctggccggccacc
ggacgaatccacacgtcctaccatcaggccgtgacggcgaccggccggctgtcgtcatcc
gatccgaacctgcagaacattccggtacggacggaagaagggcgacgcatccggcaggca
ttcatcgcgccgcccggcaagctgctgatttccgccgactactcacagattgaactgcgc
atcatggcgcatctgtccggcgatgaagggctcatccgtgccttccgggaaggccgggat
atccacagcgccactgcggccgaggtgttcggcgtgcccctcgaggacgtcaccagcgag
cagcggcggcgggccaaggccatcaacttcggcctgatctacggcatgtccgccttcggc
ctggcacgccagatcaaggtgagccgggaggaagccggacactacatcgacacctacttt
gcccggtatccgggcgtccgtgattacatggagcgcatccgccagcaggccagggaccag
gggtacgtggaaaccctgtttggccggcggctctatctgcctgacatccactcacgcaac
cgcatgcgtcagcaggcggcggagcgggcggccatcaacgcccccatgcaggggacggcc
gccgacatcatcaagcgggccatgattgcggtacatcactggctggaagcagagcaggtg
ccggccatgatgatcctgcaggttcacgatgaactcattctggaggccgaagcgtcggcg
gcagaagcggtcgcggagcggctgaagcaattgatgtcggccgcggcagagctggccgtc
cccctgcaggtggatgccggcatcggccacaactgggacgaggcacactga
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