Thermohahella caldifontis: AAIA72_12240
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Entry
AAIA72_12240 CDS
T11202
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
tcd Thermohahella caldifontis
Pathway
tcd02020
Two-component system
tcd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AAIA72_12240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AAIA72_12240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tcd02022
]
AAIA72_12240
Two-component system [BR:
tcd02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
AAIA72_12240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
HTH_8
MCM
FleQ
nSTAND3
AAA
AAA_7
DUF7317
ATPase
Motif
Other DBs
NCBI-ProteinID:
XDT71572
UniProt:
A0AB39UTJ5
LinkDB
All DBs
Position
complement(2527746..2529086)
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AA seq
446 aa
AA seq
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MNRPRILVVDDDESLLRLLELRLFAMQFDVATARSGTEALARCQQQPFDLVLTDLRMDDL
DGMELFDRLHQLNSTLPVVIMTAHGSIPEAVEATRRGVVAFLTKPIDTQDLERVLRQYAR
PSLADVPAGDMQILTRNDRMKTLLDTAQRVAASDVHVLITGESGTGKELMAQFIHRHSPR
QQGGFVAVNCGALPEGLMEAELFGFVKGAFTGALRNRDGLFRQAAGGTLFLDEIGEMPLP
LQVKLLRALQEKRIRPVGSDITLDVDVRIVSATHVDLETAVQERRFREDLYYRINVVNLH
LPPLRERREDIPLLVKHFIQQAREQGQAGQVSTVADAAMQHLVEYHWPGNIRQLQNVVQR
LLALCPGAVITPRLVADALGDQGAQPLPTLAQVREDAERRYLVSLLTLTEGVVSEAARIA
GRNRTDLYKILNRYGLDPAHFKPRSH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcctcgcattctggtggtggacgatgatgaatccctgctgcgcctgctggag
ttgcggctcttcgccatgcagttcgacgtcgccacggcccgctccggcacggaggcgctg
gcccgctgccagcagcagcccttcgatctggtgctgacggatctgcgcatggacgatctg
gacggcatggaactgtttgaccggctgcaccagctcaacagcaccctgcccgtggtgatc
atgacggcccatggcagcattcccgaagcggtggaggccacccggcggggcgtggtggcc
ttcctgaccaagcccattgatacccaggatctggaacgggtgctgcgccagtatgcccgg
ccctcgctggcggacgttccggccggggacatgcagattctgacccgcaacgaccgcatg
aagacgctgctggacacggcacagcgtgtggcggccagtgacgtgcatgtgctcatcacc
ggggaaagcggcaccggcaaggagctcatggcccagttcatccaccggcacagcccccgc
caacaggggggcttcgtggccgtcaactgcggcgctctgcccgaggggttgatggaagcg
gaactgttcggcttcgtcaagggtgcctttaccggcgcgctgcgcaaccgggatggcctc
ttccgtcaggccgccggcgggacgctgtttctggacgaaatcggcgaaatgcccctgccg
ctgcaggtgaagctgctgcgcgccctgcaggagaagcgcatccgccccgtgggatcggac
atcaccctggacgtggacgtgcgcattgtctccgccacccacgtggatctggaaacggcc
gtgcaggaacgccggttccgggaagacctgtattaccgcatcaatgtggtcaatctgcac
ctgccccccctgcgggaacggcgcgaggacattccgctgctggtgaaacacttcattcag
caggcccgggagcagggacaggccgggcaggtgagcaccgtggccgatgccgccatgcag
catctggtggaatatcactggccgggcaatatccgccagcttcagaatgtggtccagcgc
ttgctggcactctgtcccggtgccgtcatcaccccccgtctggtcgccgatgcgctcggc
gatcagggcgcccagcccctgcccacgctggcccaggtgcgtgaagacgcggagcggcgc
tacctggtcagtctgctgaccctgaccgaaggcgtggtcagcgaggcggcccgcatcgcc
ggacgcaaccggaccgacctttacaagatcctgaaccgctacggcctggatccggcccat
ttcaaaccgcgcagccactga
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