Thermohahella caldifontis: AAIA72_13300
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Entry
AAIA72_13300 CDS
T11202
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tcd Thermohahella caldifontis
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcd03021
]
AAIA72_13300 (rpoH)
Transcription machinery [BR:
tcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAIA72_13300 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
YdaS_toxin
FabD_helical_ins
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
XDT71771
UniProt:
A0AB39UU32
LinkDB
All DBs
Position
2759392..2760255
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AA seq
287 aa
AA seq
DB search
MSAATAKAMRLPVPVGNLESYIQAVNAIPVLSAEEERDLALRYREQNDLEAARQLVLSHL
RFVVHIARSYAGYGLPQADLIQEGNIGLMKAVKRFDPAFGVRLVSFAVHWIKAEIHEFIL
KNWRIVKVATTKAQRKLFFNLRGAKKRLAWLTNDEVRAVAEDLGVDERSVREMESRLAGQ
DTSFDPGVDTDDDDAWQAPVAYLEDRRYDPATLVENEEWSDDSTGRLYEALEELDERSRT
ILERRWLSDNKATLHDLADEFGVSAERIRQIEKAAMKKVKKRMAEAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcaacagcaaaagccatgaggcttccggttcccgtcggcaacttggagagc
tatattcaggctgtcaatgccatccccgttctgagtgcggaagaggaacgtgacctcgct
ctgcgatacagagagcagaatgatctggaagctgcccgtcagctggtgttgtcgcatctg
cgctttgtggtgcatattgcgcgaagttacgcaggctatggcctgcctcaggccgatctc
attcaggaaggcaacatcggtctcatgaaggccgtcaagcgctttgatccggcatttggt
gttcggctggtgtcctttgccgtgcactggatcaaggccgagattcatgaattcattctg
aagaactggcgtatcgtcaaggtggccaccaccaaggcgcagcgcaagctgttcttcaac
ctccgtggcgcgaagaagcgcctggcctggctgaccaatgacgaagtccgggccgtggcg
gaggatctgggtgtggatgagcgctctgtccgggagatggaaagccgtctggccgggcag
gacacttcctttgatcccggcgtggacactgatgatgacgatgcctggcaggcaccggtc
gcctacctggaagatcgtcgctacgatccggccacgctggtggagaacgaggagtggagt
gatgattccaccggcaggctctatgaggcgctggaggaattggatgagcgcagccggacc
atccttgagcgtcgctggttgtctgacaacaaggcgaccctgcacgatctggcagacgaa
ttcggtgtatccgccgaacgcattcgccagattgaaaaggcagccatgaagaaggtgaag
aagcggatggccgaggccgcctga
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