Thermohahella caldifontis: AAIA72_13855
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Entry
AAIA72_13855 CDS
T11202
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tcd Thermohahella caldifontis
Pathway
tcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAIA72_13855 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcd03019
]
AAIA72_13855 (pcnB)
Enzymes [BR:
tcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AAIA72_13855 (pcnB)
Messenger RNA biogenesis [BR:
tcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AAIA72_13855 (pcnB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XDT71876
UniProt:
A0AB39UUC6
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All DBs
Position
complement(2870994..2872325)
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AA seq
443 aa
AA seq
DB search
MIKKIMRWVTGNASAPQPKLRIIPRDQHPVSRKLISPNALKVLYRLNQAGHEAYIVGGGV
RDILLGHPPKDFDVATSATPEQVKALFSNCRLIGRRFRLAHVHFGREIIEVATFRALLAD
PDNTEGDAAVNDEGQITRDNVWGTKEEDALRRDFTINALYYSVEDFSIHDHAGGMEDIQA
RRLRLIGDPETRYREDPVRMLRAIRFAAKLDFEIEPRTARPIRDMAPLLDNIPPARLFEE
VLKLFLSGHGVRSFGLLREYGLFAPLFPQTDALLDQGNTLAEKLIRIALSNTDERIRQDK
PVTPAFLYAALLWPVVSARQADLEARQSLPPMQALHEAASEVIGTQIRSTALPKRFSLPM
KEIWEMQLRLARKNRKRAESLMAHPRFRAAYDFLLLREAAGEQLGGLGDWWTTMQAGRPD
TASTEPESRPRRRRRRPRKRPAP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaaatcatgcgctgggtgaccggcaatgcgtccgcaccacagcccaagctc
cgcatcattccgcgagaccagcacccggtttcccgcaaactgatcagccccaacgcgctg
aaggtactgtatcgcctgaaccaggccggccatgaagcctatatcgtgggcggcggtgta
cgtgacatactgctgggacatccgcccaaggatttcgatgtggccaccagtgccacgccg
gagcaggtcaaagccctgttcagcaactgcagactgatcggtcgccgctttcgcctggcc
cacgttcatttcggccgggaaattatcgaggtggccaccttccgcgccttgctggcagac
cccgacaatacagaaggtgatgccgccgtcaacgacgaggggcagattacccgtgacaat
gtctgggggaccaaggaagaggatgccctgcggcgcgacttcaccatcaacgccctctac
tacagcgtcgaagacttctccatccatgatcatgccggtggcatggaagatattcaggca
cgccggctgcgtctgatcggtgatccggaaacccggtaccgggaagaccccgtccgcatg
ctccgggcgatccgctttgcagccaaactggattttgaaatcgagccccgcactgcacga
ccgatccgcgacatggcacccttgctggacaacatccccccggcccgcctcttcgaagaa
gtgctgaagctgttcctgtccgggcacggtgtgcgcagcttcgggctgctgcgcgaatac
ggactctttgcgccgctgtttccccagaccgatgcactgctcgaccagggtaacaccctt
gccgaaaaactgatccgcatcgcactgtcgaatacggacgaacgtatccgccaggacaag
cccgtgaccccggcatttctttatgcggcactactctggcccgtggtcagcgcaaggcag
gccgaccttgaagcccggcaaagcctgccgcccatgcaggccctgcatgaggccgcgtcg
gaagtcatcggcacacagattcgcagcacggccctgcccaaacgcttcagcctgcccatg
aaggaaatctgggaaatgcagctgaggctggcgcgcaagaaccgcaagcgcgcggagtca
ctcatggcccatccgcgcttccgcgcggcctatgattttctcctgctgcgtgaagctgcc
ggtgagcagctgggcggactgggcgactggtggacgaccatgcaggccggacgcccggat
acggccagtaccgaaccggaatccagaccacgccgcagaagacggcgtccacgcaaacgg
ccggcaccatga
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