Thermohahella caldifontis: AAIA72_16035
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Entry
AAIA72_16035 CDS
T11202
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tcd Thermohahella caldifontis
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcd03016
]
AAIA72_16035 (truB)
Enzymes [BR:
tcd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAIA72_16035 (truB)
Transfer RNA biogenesis [BR:
tcd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAIA72_16035 (truB)
Prokaryotic type
AAIA72_16035 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
TruB_C
DKCLD
BetaGal_ABD_1
Motif
Other DBs
NCBI-ProteinID:
XDT72284
UniProt:
A0AB39UVW1
LinkDB
All DBs
Position
3305756..3306676
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AA seq
306 aa
AA seq
DB search
MARSKSRGRPVHGVVLVDKPQGMTSHTVVQRVRKCFQAARAGHTGALDPLATGLLPVCLG
EATKFGNVLLESDKGYEAIARLGQTTDTGDADGQVLDTRPVPLRHEVDLDDLVRRFSGVI
EQIPPMYSALKHKGTPLHKLARQGVEVERAPRPVTIHALNLAWVDDERLKVTVRCSKGTY
IRVLVEDMGRVLGCGAHVEQLRRTEVAGLQVSEAVPLDVLSECGAPEDYLLPVDTLVQHL
PVQVLDSAQKHSLLHGQPVTITPRSEAGDVRLYGPGGEFIGLGIAEGAQLRSRRLVSTDY
LQILNL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccaggagtaagtctcgcggcagacctgtgcatggcgttgtgctggtggacaagcct
cagggcatgacgtcccacacggtggtgcaacgggtgcgcaagtgctttcaggcggccagg
gccgggcatacgggagcgctggatccgctggccaccggcctgctgccggtctgtctggga
gaggccaccaagttcggcaatgtgctgcttgagtcggacaagggctacgaagccatagcc
cgcctgggacagacgacggacaccggtgatgctgacggtcaggtgctggacacccggccc
gttccccttcggcacgaggtggatctggatgatctggttcgccgcttcagcggtgtgatc
gagcagattccgcccatgtattcggcgctgaagcacaagggtaccccgctgcacaagctc
gctcgccagggggtggaggtggaacgcgcaccacggcccgtgaccatccatgcgctcaat
ctggcgtgggtggatgatgagcgtctgaaagtcaccgtacggtgctccaaggggacctat
atccgtgtgctggtggaggatatggggcgcgtgctgggttgcggtgctcacgtggaacag
ctccggcggacggaagtggccggattgcaggtcagtgaggccgttccgctggatgtgctg
agcgaatgtggtgcaccggaagattatctgttgcccgtggacacgctggttcagcatctg
ccggttcaggtgctggattcggcgcaaaagcactcgcttctccatgggcaaccggttaca
ataacgccccgttctgaagcgggagacgtacgactgtacggccccgggggcgagttcatc
ggactgggtattgcggaaggcgcgcaattgcgctcgcgacggctggtcagtacggactat
cttcagatactgaacctctag
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