Thermohahella caldifontis: AAIA72_16045
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Entry
AAIA72_16045 CDS
T11202
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tcd Thermohahella caldifontis
Pathway
tcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAIA72_16045 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcd03019
]
AAIA72_16045 (pnp)
03016 Transfer RNA biogenesis [BR:
tcd03016
]
AAIA72_16045 (pnp)
Enzymes [BR:
tcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAIA72_16045 (pnp)
Messenger RNA biogenesis [BR:
tcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAIA72_16045 (pnp)
Transfer RNA biogenesis [BR:
tcd03016
]
Prokaryotic type
tRNA degradation factors
AAIA72_16045 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
XDT72286
UniProt:
A0AB39UWY6
LinkDB
All DBs
Position
3307161..3309269
Genome browser
AA seq
702 aa
AA seq
DB search
MNPIRKTFQYGQTTVTLETGRIARQATGAVMVTMGDTAVLATVVAAKEAKEGQGFFPLTV
HYQEKTYAVGKIPGGYFKREGRPTEKETLTSRLIDRPIRPLFPNGFMNEVQLICTVMSAS
KDHDPDIAAMIGASAALAVSGIPFEGPIGAARVGYTDDKGYILNPANHELEHSRLDMVVA
GTGDAVLMVESEAKELSEDEMLGAVLFAHEEMQCVIQAINEFAAEANVQKWDWTPPAENE
ALKTLVKEKYAAAITEAYTISDKMQRYARLGELRDQAIAELAPEEGEYSAEEVKSYFGKL
EKEIVRERILSGQPRIDGRDTRTVRPITCEIGVLPRTHGSALFTRGETQALVTVTLGTAR
DALIVDALEGERKEPFLFHYNFPPFSVGEVSRLGSVGRREIGHGRLARRGVQAVMPSQDD
FPYVIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLIKEGDRYAVLTD
ILGDEDHLGDMDFKVAGTAEGVTALQMDIKINGITEEIMEIALAQAHEARLHILGEMAKV
IAKPREGLSDTAPRMVQIKIDPDKIRDVIGKGGATIRALCEETGASIDIEDDGTVRIYAD
TALAADDALYRIQEITAEAEIGKVYKGKVARIVEFGAFVTFLPGKDGLVHISQIAQERVK
DVNDYLKEGEEVYVKVLDVDQRGRVKLSIKEVTDADKAELEG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcccatccgtaaaacgtttcaatatggccagacaacagtaactttggaaacaggg
cggattgcccggcaggccaccggtgccgtcatggtgaccatgggcgacacagccgtactg
gccacggttgtggcggcaaaggaggccaaggaaggacagggcttcttcccgctgaccgtt
cactatcaggaaaagacctacgcggtgggcaagattcccggtggctacttcaagcgtgaa
ggccgtccgaccgaaaaggaaaccctgacctcccgcctcatcgaccgccccatccgcccc
ctgttccccaacggattcatgaacgaagtacagcttatctgtaccgtgatgtccgccagc
aaggatcacgatccggatatcgccgccatgatcggtgcctcggcagcgctggccgtgtcc
ggcatccccttcgaggggccgatcggcgccgcccgcgtcggctacacggacgacaagggc
tatatcctcaacccggccaatcatgagctggagcattcccgcctggacatggttgtggcc
ggtaccggagatgctgtcctgatggtggaatccgaagccaaggagctgtcggaagacgaa
atgctgggtgccgtgctgtttgcccacgaagaaatgcagtgcgtgatccaggccatcaac
gagtttgccgccgaagccaatgtgcagaagtgggactggacgccgccggcagaaaatgag
gcgctcaagacgctggtgaaagagaagtacgccgccgccattaccgaggcctacaccatt
tcggacaagatgcagcgctatgcgcgtctgggtgagctgcgtgatcaggccatcgccgag
ctggctccggaagagggtgagtacagcgcggaagaggtgaagagctacttcggcaagctg
gaaaaggaaatcgtccgcgagcgcattctttccggccaaccccggattgacggccgcgat
acccgtaccgtgcggcccattacctgtgaaatcggtgtactgccgcgtacccatggttcc
gccctgttcacccgcggtgaaacccaggcgctggtgaccgtgacgttgggtacggcccgt
gacgcactcatcgtcgatgccctggaaggcgagcgcaaggagcctttcctgttccactac
aatttcccgccgttctccgtgggtgaagtcagccgcttgggctccgtcggccgccgtgaa
atcggtcatggtcgtctggcacgccgtggtgtgcaggccgtgatgccgagccaggatgac
ttcccctatgtcatccgtgctgtgtccgaaatcaccgagtccaacggctcctcgtccatg
gccagtgtgtgtggttcatccctggcactgatggatgcaggggtgcccatcaaggcaccg
gtggcgggtattgccatgggcctgatcaaggaaggcgaccgctatgccgtgctgaccgat
atcctcggtgacgaggatcacctgggtgacatggacttcaaggtggccggtaccgcggaa
ggcgtaacggccctgcagatggacatcaagatcaacggcatcacggaagagatcatggaa
atcgcactggcgcaggcccatgaagcccggttgcacattcttggtgaaatggcgaaggtg
atcgccaaaccgcgtgaaggactgtccgatacggcgccgcgcatggtgcagatcaagatc
gatccggacaagatccgtgacgtcatcggcaaggggggtgctaccatccgtgcgctgtgt
gaggaaaccggtgcgtccatcgacatcgaggacgacggcacggtgcgcatttatgccgac
acggctctggcggcagatgacgccctgtaccgcatccaggaaatcactgcggaagcggaa
atcggcaaggtctacaagggcaaggtggcgcgcatcgtggaattcggtgcatttgtgacc
ttcctgccgggcaaggacggactggtgcacatctcccagatcgcccaggagcgtgtcaag
gatgtgaatgattacctcaaggaaggggaagaggtttacgtgaaggtgctggatgtggat
cagcgcggccgcgtgaagctgtccatcaaggaggtgaccgacgcggacaaggcggagctg
gagggctga
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