Thermococcus celer: A3L02_03450
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Entry
A3L02_03450 CDS
T05076
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tce
Thermococcus celer
Pathway
tce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L02_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tce03019
]
A3L02_03450
03009 Ribosome biogenesis [BR:
tce03009
]
A3L02_03450
Enzymes [BR:
tce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3L02_03450
Messenger RNA biogenesis [BR:
tce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3L02_03450
Ribosome biogenesis [BR:
tce03009
]
Prokaryotic type
rRNA helicases
A3L02_03450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2278
CMS1
Cas3-like_C_2
P-loop_SecA
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
ASI98682
UniProt:
A0A218P184
LinkDB
All DBs
Position
623571..624788
Genome browser
AA seq
405 aa
AA seq
DB search
MSFENLGLSEATLVAVREKGFETPTDIQREVIPRLLSGDVDIIGQSQTGTGKTAAFALPI
IEAIDPKMRAVQAIVLTPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQIRALERG
THVVVGTPGRVLDHIRRGTLDLSSVKFFILDEADRMLDMGFIDDIEAIFRETPKEKRVLM
FSATMPPEIKRLARRYMSNHEVISVSSDELVPEMVDQEYVEVVPARKFGVLKKILDDDFY
GIVFCATKRETRELSERLRRAGYSAEALNGDMSQAARERAFWRFKTRRTRVLVATDVAAR
GLDVQDISHIVNYSLPMTAEDYVHRIGRTGRMGKRGRAITFTMPGELKRLHYFAQQAGVE
IRKSELSEEIPREYRERYERGRSDGYWRGRRRNYGGYSKSSRGRW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaaacttgggcttatccgaggccacgttagtggcggttagggagaagggt
tttgagaccccaacggacattcagagggaggtgatcccgcgtcttctatctggcgacgtg
gatataatcggccagtcccagacagggacgggaaagacggccgctttcgccttgccgata
atcgaggccatcgacccgaagatgcgggccgttcaggcgattgtgctgaccccaacgagg
gagctcgcccttcaggtggcggatgaaatcaagagcctccgcgggaggaagagggtctac
gtctacgccgtctacggcggtcaaccgataggaccgcagataagggcgctcgagagggga
acccacgtcgttgttggaacccccggaagggttctcgaccacataaggcgcggaaccctc
gatctaagctcggtgaagttcttcattctcgacgaggccgacaggatgctcgacatgggc
ttcatcgacgacatagaggcgatcttcagggagaccccgaaggagaagcgcgtgctcatg
ttctccgcgaccatgcccccggagatcaagaggctcgcgagacgctacatgagcaaccac
gaggtgataagcgtcagcagcgacgagctggttcccgagatggtggatcaggagtacgtg
gaggtcgttccggcgaggaagttcggcgtgctgaagaagatcttggacgacgatttctac
ggcatagtcttctgcgcgaccaagcgggagacccgggagctgagcgagaggctcaggagg
gcaggctattccgccgaggccctgaacggcgatatgagccaggccgcccgtgagagggcc
ttctggcgcttcaaaaccaggcggacgagggttctcgtggcgaccgatgtggccgcccgc
ggactggacgtccaggacataagccacatcgtcaactactccctgcccatgacggccgag
gactacgtccacaggataggcaggaccggcaggatggggaagaggggaagggcgataacc
ttcacgatgcccggcgagctcaagaggctccactacttcgcccagcaggctggtgtggag
ataaggaagtccgagctcagcgaggagatccccagggagtacagggaaaggtacgagcgc
ggccgctccgatggctactggagagggaggagaagaaactacgggggctactctaagagc
tcccgaggtagatggtga
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