Thermococcus celer: A3L02_03795
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Entry
A3L02_03795 CDS
T05076
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tce
Thermococcus celer
Brite
KEGG Orthology (KO) [BR:
tce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tce03016
]
A3L02_03795
Enzymes [BR:
tce01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A3L02_03795
Transfer RNA biogenesis [BR:
tce03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A3L02_03795
Prokaryotic type
tRNA splicing ligases
A3L02_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
LAGLIDADG_3
Intein_splicing
LAGLIDADG_WhiA
Motif
Other DBs
NCBI-ProteinID:
ASI98747
UniProt:
A0A218P1F9
LinkDB
All DBs
Position
691880..694681
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AA seq
933 aa
AA seq
DB search
MVPLKRIDRIRWEIPKFDERMRVPGRVYADDQLIEKMRGDKTLEQAANVAMLPGIYKYSI
VMPDGHQGYGFPIGGVAAFDVKEGVISPGGVGYDINCLAPGSKVLTEHGYWVRVEEMPER
FKLQGLRVYDVDEGHNDFSGVAFVAEREVEPEELAVRIITESGKVIEGSEDHPVLTPKGY
VHLGNVKEGEEVLVYPFEGVEFEPGTGILLSEGDFDGEDARMVRFLKDRGLLPLRGEDPR
VGTLARILGFAFGNGHLGEMDGRLYLSFYGREETLRELKKDLERLGINADLYVRGRNYGI
ETTSGSYGAAELRVTSRAFALLMEKLGMPRGRKTEKAYGVPGWIKDAPLWVKRNFLAGLF
AADGSIAEFKGTTPLPINLTQSKAKELEENLVEFMKEIGELLAEFGIRTTLYRVRSRKGV
TYRLALVGEESIRNFLGRVNYEYDLEKKAKGLVAYAYLKFKERVKGERRNAAETASFVER
AVYEGPKEPRVPEDFPTFEEFARERGYEGGFVAERVVRVEKVKPSYDRFYDVGVYHRAHN
FIANGIVVHNCGVRLIRTNLTEEEVRPKIKQLVDTLFKNVPSGLGSKGRVRLHWSKLDDV
LADGAKWAVDNGYGWEEDLEHLEEGGRMEGADPDAVSQKAKQRGAPQLGSLGSGNHFLEV
QVVDKVFDERIAKAYGLHEGQVVVMVHTGSRGLGHQVASDYLRVMEKANRKYKVPWPDRE
LVSVPFQTEEGQRYFSAMKAAANFAWANRQMITHWVRESFEEVFKRKAEDMEMGIVYDVA
HNIAKVEEHEVDGRKVKVVVHRKGATRAFPAGHPDVPRAYRDVGQPVLIPGSMGTASYVL
AGAEGSMRETFGSSCHGAGRLLSRRAATRRYRGDKLRNELMGRGIYVRAASMRVVAEEAP
GAYKSVDNVVNVVHQAGIANLVARMRPMGVAKG
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgctgaagaggatagacaggataaggtgggagatcccgaagttcgacgagagg
atgcgcgttccgggcagggtttacgctgacgaccagcttatagagaagatgaggggcgat
aagaccctcgagcaggcggcaaacgttgccatgcttcccggaatttacaagtactcgata
gtcatgcccgacggccatcagggctacggcttcccgataggcggcgtcgcggccttcgac
gtcaaagagggcgtgataagccccggaggcgtcggctacgacatcaactgccttgctccc
ggttccaaagttctaacggagcacggctactgggtcagggtcgaggagatgccggagagg
ttcaagctccagggactgagggtttacgacgttgacgagggccacaacgacttctcgggg
gttgccttcgtcgctgagagggaggtggagccggaggagctcgccgtcaggataatcacc
gagtcaggaaaggtcatcgaggggagcgaggaccatccggttctcaccccgaagggatac
gtccacctcggcaacgtgaaggaaggggaggaggttctcgtctatcccttcgagggcgtt
gagttcgaacccgggacgggaatccttctgagcgaaggggacttcgacggcgaggacgcc
cggatggtccgcttcctgaaggataggggactgttaccgctccgcggggaggacccgagg
gtggggacgctcgcgaggatcctgggcttcgccttcgggaacggacacctcggcgagatg
gatgggaggctctacctgagcttctacggaagggaggaaacgctcagggagctcaagaag
gacctcgagaggctcgggataaacgcggacctctacgtcagggggaggaactacggcatc
gaaacgaccagcggctcctacggggcggccgagctcagggtcacctcgagggccttcgct
cttctgatggagaagcttgggatgccgcggggaaggaagaccgagaaggcttacggcgtc
cccgggtggattaaggacgcccccctctgggtaaagaggaacttcctggccggactcttc
gcggcggacggaagcatcgccgagttcaaaggaactacgccgttgccgataaacctcacc
cagtcgaaagctaaggaactcgaggagaacctcgtggagtttatgaaggagattggagag
ctcctcgcggagttcggaatcaggacaaccctctacagggtcaggtccaggaaaggcgtt
acctaccggctcgcactcgtcggcgaggagagcatcaggaacttcctcgggagggtaaac
tacgagtacgacctcgagaagaaggccaagggcctggtagcatacgcctacctgaagttc
aaggagcgcgttaagggggagaggagaaacgcggcggaaaccgccagcttcgtcgagagg
gccgtctacgaaggtccaaaagagccgcgcgttccagaggactttccaacctttgaggag
ttcgcgagggagaggggctacgagggcggcttcgtggccgagcgggtcgttagggtcgag
aaagtcaagccaagctacgacaggttctacgacgtcggggtttaccacagggcccacaac
ttcatcgccaacgggatagtcgtccacaactgcggcgtccgcctgataagaaccaacctg
accgaggaggaggtcaggccgaagatcaaacagctcgtcgacacgctcttcaagaacgtc
ccgagcggccttgggagtaagggaagggtgaggctccactggagcaaactcgacgacgtc
ctggcggatggggcaaagtgggccgtcgataacggctacggctgggaggaggacctcgag
cacctcgaggaaggcgggaggatggagggggcagatccagatgcggtcagccagaaggcc
aaacagcgcggggctccacagcttggctccctcggctccggaaaccacttcctcgaggtt
caggtggtcgataaggtcttcgacgagaggatagcgaaggcctacggtctccacgagggc
caggtcgttgtcatggtgcacaccggatcgagggggctcgggcaccaggtggcgagcgac
tacctcagggtgatggagaaggccaacaggaagtacaaagtgccgtggcccgacagggag
ctcgtcagcgttcccttccagacggaggagggacagaggtacttcagcgcgatgaaagcg
gccgcgaacttcgcgtgggccaacaggcaaatgataacccactgggtaagggaaagcttc
gaggaggtcttcaaacgcaaggctgaagacatggagatggggatagtctacgacgtcgcc
cacaacatagcgaaggtcgaggagcacgaggtggacggaaggaaggtcaaggtggtcgtc
cacaggaaaggtgccacgagggccttcccagcgggccatccggacgttccgagggcctac
cgcgatgtaggtcagcccgtcctgattccgggctcgatggggacggcgagctacgttctg
gccggtgccgagggctccatgagggagaccttcggctcgagctgccacggcgccgggagg
ttactaagcaggcgcgcggccacgaggcggtaccgcggcgataaactgaggaacgagctg
atggggaggggaatctacgtcagggcggcgagcatgagggtcgtcgccgaggaagccccc
ggtgcctacaagagcgtcgacaacgtggtgaacgtggtccatcaggccgggatagctaac
ctcgtggcgaggatgcgcccgatgggcgttgcgaagggctga
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