Thermococcus celer: A3L02_05645
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Entry
A3L02_05645 CDS
T05076
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tce
Thermococcus celer
Pathway
tce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L02_05645 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tce03021
]
A3L02_05645 (tfb)
Transcription machinery [BR:
tce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L02_05645 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L02_05645 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_IS1595
Cyclin_N
Zn_ribbon_tTFIIB
Cyclin_C
UPF0253
HTH_24
YceG
HTH_AsnC-type
Cas12f1-like_TNB
Zn_ribbon_10
RB_B
Lar_restr_allev
DUF7577
C1_2
Motif
Other DBs
NCBI-ProteinID:
ASI99085
UniProt:
A0A218P2D3
LinkDB
All DBs
Position
complement(1014066..1014977)
Genome browser
AA seq
303 aa
AA seq
DB search
MADKMVCPRCGSTNIQYDPMRGEYYCSDCGYVIEQNVIDEGPEWRAFDPDQRAKRARTGA
PMTLMIHDKGLSTDIDWRDRDIHGNQITGMYRTKLRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMRLPRRVKESAASLYRKAVMKKLIRGRSIEGMVSAALYAACRIERMPRTLDE
IAAVSKVTKKEIGRSYRFLARGLGLNLRPTSPIDYVDRFGDALHVSQKTKKRAKEILQEA
IKRGITSGKGPTGLAAAALYVASILEDEKKTQREVAEVAHVTEVTVRNRYKELVEKLGIN
VPI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataagatggtttgtccgaggtgtggttcgaccaatattcagtacgaccccatg
agaggggagtactattgctccgattgtggttacgtcatcgagcagaacgttatcgatgag
gggccggaatggcgcgccttcgaccccgatcagagggcaaagcgcgccagaaccggtgcg
cccatgacgttgatgatccacgataagggtctctccacggacatagactggcgcgatagg
gacatccacggcaaccagataaccggcatgtacaggacgaaactgagaaggctgaggatg
tggcagcgcaggatgaggataaacgacgccgccgagcgtaacctcgccttcgccctcagc
gagctcgacaggatggccgcccagatgagactgccgaggcgcgttaaagagagcgccgcc
tcactttaccggaaggcggtaatgaagaagctcatccgcgggaggtccatagagggcatg
gtctcggcggcgctctacgccgcctgcaggatagagaggatgccacggacgctcgacgag
atagcggccgtctcaaaggtaactaagaaggagataggcaggagctaccgcttcctcgcg
aggggcctcggtctcaacctcagaccgaccagcccgatagactacgtcgaccgcttcggt
gatgcgctccacgtcagccagaaaacaaagaagcgcgccaaggaaatactccaggaggcc
atcaagaggggcatcaccagtggaaagggtccaacggggctcgccgccgcggcactttac
gttgcatcgattctggaggacgagaagaagacccagcgtgaggtggcggaggtagcgcac
gtcactgaggtcaccgtcaggaacaggtataaggaactcgtcgagaagctcggcataaac
gtcccgatatga
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