Thermococcus celer: A3L02_05960
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Entry
A3L02_05960 CDS
T05076
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tce
Thermococcus celer
Brite
KEGG Orthology (KO) [BR:
tce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tce03400
]
A3L02_05960
DNA repair and recombination proteins [BR:
tce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3L02_05960
Archaeal homologous recombinant proteins
A3L02_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
Baculo_PEP_C
ABC_tran
AAA_21
AAA_29
AAA_13
OVT1
Seryl_tRNA_N
BLOC1_2
SbcC_Walker_B
DUF1664
Fib_alpha
Crescentin
MscS_porin
FlgK_D1
IFT57
FlaC_arch
ABC_ATPase
Laminin_II
HMBD
DNA_ligase_ZBD
Zn_ribbon_PaaD
Phage_GP20
PhetRS_B1
Motif
Other DBs
NCBI-ProteinID:
ASI99142
UniProt:
A0A218P2I8
LinkDB
All DBs
Position
1074244..1076901
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AA seq
885 aa
AA seq
DB search
MRIEKLIVKDFRSHGLTRVTFTSGINLIIGQNGNGKSSLLDALLIGLYWPSRPKDLKKDD
ILRAGGTSTEVTVFFEKDGVRYQIHRNITRGMAFAKYHDGTSWKHVTEASQRAVRDWMER
LVPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENAYRNLLEVRKEIERRIS
SAEDYLKSTENLDGLMEELERELEDTLREINELSPQIPELEKKLGEVEKRLGELDALAEE
INALRLKIRQREGNVKALEARLGELKKGIEEIRKRIGELEKKVKEFRRLKEKAELYLKLV
EFRKRYADEKARNEKLAEGYRTQIKAIEERLSELGEMEKRIRELEKKREELKGKIEGLEE
SVKAYEEVRSLKGNLERLKKRLELKPEEIERLGKEIEAAKRRKDEIQRELEEINGKRGEL
KSRVGERNKAILELKKAKGRCPVCGSELTEEHKRELITKYQLEVKDVLREIRELDSREQK
LRSELVKVEATLKRERELISQMELFEQIKELEGKLKKYDLEGLRKAVEECDELKAALGEV
EGELKSLKTEFGKAKALEKRKEELRKKLEAIERKLAELEGELAELGFSSVGELDERVKEL
EPAYRRYLELKGAESELESERKRLERTEKELAEAEKELQEESSSLKGLRESLREKEKLYS
KEEHEKIRESFVSLSRELAGKRTQLKELEKKRDGTMEKLKKLGEEKERRKERAKELEELR
KARERVQSLREKVRRYKAMLKEEALAKVGELASEIFEELTEEKYSGVTVKAEDRGIRLGV
VYNGKEYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDEERRRRLVDIM
GRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVKEVELGV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgagaagctcatcgtcaaggacttccgctcccacgggctgaccagggtcacc
ttcacgagcgggataaacctgataatcggccagaacgggaacggcaagagttccctcctc
gacgcgctcctcattggcctctactggcccagcaggcccaaggacctcaagaaggacgat
atcctccgcgcgggtggaacctccaccgaggtgacggtcttcttcgagaaggacggcgtt
aggtaccagatccacaggaacataacccgcgggatggccttcgccaagtaccacgacggg
acctcgtggaagcacgtaaccgaggcgagccagagggccgtgagggactggatggagagg
ctcgtcccctacgacgtcttcctcaacgcgatatacatacggcagggagagatagacgcg
atactcgagagcgacgagagcagggagaaggtcgtgaggcaggttctcggccttgacagg
tacgagaacgcctacaggaacctcctcgaggtgaggaaggagatagagcgcaggataagc
tcggcggaggactacctgaagagcacggagaacctcgacgggcttatggaggagctggag
agggagctcgaggataccctgagggagataaacgaactctcaccgcagattccggagctg
gagaagaaactcggggaagttgagaaaaggctcggggagctcgacgccctcgccgaggag
ataaacgccctaagactcaagataaggcagagggaaggtaacgtgaaggccctcgaggcg
aggctcggagagctgaagaaaggaatcgaggagatcaggaagcgcattggggagctggag
aagaaagtgaaggaatttagaaggctaaaggagaaagcagagctctacctaaagctggtg
gagttcaggaagcgctacgctgacgaaaaggcgaggaacgagaagctcgccgagggttac
aggacgcagataaaggctatagaggaacgcctctccgagctgggagagatggaaaagcgc
atcagggagcttgagaaaaaaagggaggagctcaagggcaagatcgaggggctcgaggag
agcgttaaggcctacgaggaggtcaggagccttaagggtaacctggagcggttgaaaaag
aggctcgagctcaaaccggaggagattgaaaggctcgggaaggagatagaggccgccaaa
aggaggaaggacgagatacagcgggagctcgaggagataaacgggaagaggggcgagctg
aagagcagagttggagagaggaacaaggcaatcctcgagctcaaaaaagccaagggcaga
tgtccggtctgcggctcggagctgacggaggagcacaagcgggagctgataacgaagtac
cagctcgaggttaaggacgtcttgagggagataagggaactcgattcgcgggagcagaag
ctgaggagcgagctcgtgaaggtcgaggcgacgctgaagagggagcgcgagctcatatca
cagatggagctcttcgaacagataaaggaacttgagggcaagctgaaaaaatacgacctc
gaggggcttaggaaagccgtggaggaatgcgacgaactgaaggccgcgctcggagaggtc
gagggcgagctcaaaagcctgaagaccgagttcgggaaggctaaggccctcgagaaaagg
aaggaggagctcaggaagaaactggaagccatcgagaggaagctcgcggaactcgagggg
gaactcgcggaactcggcttctcgagcgttggagaactcgacgagagggttaaggaactc
gaacctgcttacaggaggtacctggagctcaagggggcggaaagcgagcttgagagtgaa
aggaagcgtctcgaaagaacggagaaggagctggcggaggcggagaaagaactccaagag
gaatcctcttccctcaaggggctgagggagagcctccgggagaaagagaaactctacagc
aaagaggagcacgagaagatcagggaatcgttcgtttcgttgagcagggagctggccggg
aagagaacccagctaaaggagctggagaagaagcgcgacgggacgatggagaaactcaag
aagctcggagaggagaaggagcgcaggaaggaaagggcgaaagagctcgaggagctgcgg
aaggcccgcgagagggttcaatcgctgagggagaaggtgaggcgctacaaggccatgctc
aaggaggaagcgctggcgaaggtcggggagctggccagcgagatattcgaggagctgacg
gaggagaagtactcgggggtcaccgttaaggcggaagacagggggataaggctgggcgtc
gtctacaacgggaaggaatacggcctcggcttcctcagcggcggcgagaggatagcgctg
ggtctggcattcaggctggcgctgtcgctttacctggccggagagataagcctgctcata
ctcgacgagcccacaccgtacctcgacgaggagaggaggagaaggctcgttgacataatg
ggacgctacctgaggaagataccgcaggtcatagtggtctcccacgacgaggagctgaag
gacgccgccgacagggtgatacgcgtgagccttgagaacggcgtctccgtggtcaaagag
gtcgagctgggggtgtga
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