KEGG   Thermococcus celer: A3L02_05960
Entry
A3L02_05960       CDS       T05076                                 
Name
(GenBank) DNA repair protein Rad50
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
tce  Thermococcus celer
Brite
KEGG Orthology (KO) [BR:tce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tce03400]
    A3L02_05960
DNA repair and recombination proteins [BR:tce03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A3L02_05960
    Archaeal homologous recombinant proteins
     A3L02_05960
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SMC_N AAA_15 Baculo_PEP_C ABC_tran AAA_21 AAA_29 AAA_13 OVT1 Seryl_tRNA_N BLOC1_2 SbcC_Walker_B DUF1664 Fib_alpha Crescentin MscS_porin FlgK_D1 IFT57 FlaC_arch ABC_ATPase Laminin_II HMBD DNA_ligase_ZBD Zn_ribbon_PaaD Phage_GP20 PhetRS_B1
Other DBs
NCBI-ProteinID: ASI99142
UniProt: A0A218P2I8
LinkDB
Position
1074244..1076901
AA seq 885 aa
MRIEKLIVKDFRSHGLTRVTFTSGINLIIGQNGNGKSSLLDALLIGLYWPSRPKDLKKDD
ILRAGGTSTEVTVFFEKDGVRYQIHRNITRGMAFAKYHDGTSWKHVTEASQRAVRDWMER
LVPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENAYRNLLEVRKEIERRIS
SAEDYLKSTENLDGLMEELERELEDTLREINELSPQIPELEKKLGEVEKRLGELDALAEE
INALRLKIRQREGNVKALEARLGELKKGIEEIRKRIGELEKKVKEFRRLKEKAELYLKLV
EFRKRYADEKARNEKLAEGYRTQIKAIEERLSELGEMEKRIRELEKKREELKGKIEGLEE
SVKAYEEVRSLKGNLERLKKRLELKPEEIERLGKEIEAAKRRKDEIQRELEEINGKRGEL
KSRVGERNKAILELKKAKGRCPVCGSELTEEHKRELITKYQLEVKDVLREIRELDSREQK
LRSELVKVEATLKRERELISQMELFEQIKELEGKLKKYDLEGLRKAVEECDELKAALGEV
EGELKSLKTEFGKAKALEKRKEELRKKLEAIERKLAELEGELAELGFSSVGELDERVKEL
EPAYRRYLELKGAESELESERKRLERTEKELAEAEKELQEESSSLKGLRESLREKEKLYS
KEEHEKIRESFVSLSRELAGKRTQLKELEKKRDGTMEKLKKLGEEKERRKERAKELEELR
KARERVQSLREKVRRYKAMLKEEALAKVGELASEIFEELTEEKYSGVTVKAEDRGIRLGV
VYNGKEYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDEERRRRLVDIM
GRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVKEVELGV
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgaggattgagaagctcatcgtcaaggacttccgctcccacgggctgaccagggtcacc
ttcacgagcgggataaacctgataatcggccagaacgggaacggcaagagttccctcctc
gacgcgctcctcattggcctctactggcccagcaggcccaaggacctcaagaaggacgat
atcctccgcgcgggtggaacctccaccgaggtgacggtcttcttcgagaaggacggcgtt
aggtaccagatccacaggaacataacccgcgggatggccttcgccaagtaccacgacggg
acctcgtggaagcacgtaaccgaggcgagccagagggccgtgagggactggatggagagg
ctcgtcccctacgacgtcttcctcaacgcgatatacatacggcagggagagatagacgcg
atactcgagagcgacgagagcagggagaaggtcgtgaggcaggttctcggccttgacagg
tacgagaacgcctacaggaacctcctcgaggtgaggaaggagatagagcgcaggataagc
tcggcggaggactacctgaagagcacggagaacctcgacgggcttatggaggagctggag
agggagctcgaggataccctgagggagataaacgaactctcaccgcagattccggagctg
gagaagaaactcggggaagttgagaaaaggctcggggagctcgacgccctcgccgaggag
ataaacgccctaagactcaagataaggcagagggaaggtaacgtgaaggccctcgaggcg
aggctcggagagctgaagaaaggaatcgaggagatcaggaagcgcattggggagctggag
aagaaagtgaaggaatttagaaggctaaaggagaaagcagagctctacctaaagctggtg
gagttcaggaagcgctacgctgacgaaaaggcgaggaacgagaagctcgccgagggttac
aggacgcagataaaggctatagaggaacgcctctccgagctgggagagatggaaaagcgc
atcagggagcttgagaaaaaaagggaggagctcaagggcaagatcgaggggctcgaggag
agcgttaaggcctacgaggaggtcaggagccttaagggtaacctggagcggttgaaaaag
aggctcgagctcaaaccggaggagattgaaaggctcgggaaggagatagaggccgccaaa
aggaggaaggacgagatacagcgggagctcgaggagataaacgggaagaggggcgagctg
aagagcagagttggagagaggaacaaggcaatcctcgagctcaaaaaagccaagggcaga
tgtccggtctgcggctcggagctgacggaggagcacaagcgggagctgataacgaagtac
cagctcgaggttaaggacgtcttgagggagataagggaactcgattcgcgggagcagaag
ctgaggagcgagctcgtgaaggtcgaggcgacgctgaagagggagcgcgagctcatatca
cagatggagctcttcgaacagataaaggaacttgagggcaagctgaaaaaatacgacctc
gaggggcttaggaaagccgtggaggaatgcgacgaactgaaggccgcgctcggagaggtc
gagggcgagctcaaaagcctgaagaccgagttcgggaaggctaaggccctcgagaaaagg
aaggaggagctcaggaagaaactggaagccatcgagaggaagctcgcggaactcgagggg
gaactcgcggaactcggcttctcgagcgttggagaactcgacgagagggttaaggaactc
gaacctgcttacaggaggtacctggagctcaagggggcggaaagcgagcttgagagtgaa
aggaagcgtctcgaaagaacggagaaggagctggcggaggcggagaaagaactccaagag
gaatcctcttccctcaaggggctgagggagagcctccgggagaaagagaaactctacagc
aaagaggagcacgagaagatcagggaatcgttcgtttcgttgagcagggagctggccggg
aagagaacccagctaaaggagctggagaagaagcgcgacgggacgatggagaaactcaag
aagctcggagaggagaaggagcgcaggaaggaaagggcgaaagagctcgaggagctgcgg
aaggcccgcgagagggttcaatcgctgagggagaaggtgaggcgctacaaggccatgctc
aaggaggaagcgctggcgaaggtcggggagctggccagcgagatattcgaggagctgacg
gaggagaagtactcgggggtcaccgttaaggcggaagacagggggataaggctgggcgtc
gtctacaacgggaaggaatacggcctcggcttcctcagcggcggcgagaggatagcgctg
ggtctggcattcaggctggcgctgtcgctttacctggccggagagataagcctgctcata
ctcgacgagcccacaccgtacctcgacgaggagaggaggagaaggctcgttgacataatg
ggacgctacctgaggaagataccgcaggtcatagtggtctcccacgacgaggagctgaag
gacgccgccgacagggtgatacgcgtgagccttgagaacggcgtctccgtggtcaaagag
gtcgagctgggggtgtga

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