Tigriopus californicus (tidepool copepod): 131876797
Help
Entry
131876797 CDS
T09700
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131876797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131876797
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131876797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
131876797
NCBI-ProteinID:
XP_059078270
LinkDB
All DBs
Position
2:complement(11648439..11650784)
Genome browser
AA seq
659 aa
AA seq
DB search
MSDKESSKSRSSSIEEAIKEVVKDLENIEQGGGNPNERGEWGNHCEFFLSSLGLAVGLGN
IWRFPYVCYENGGAAFLIPYIIMLFIVGLPMFFLEMVLGQYAGLSCTKIFARMTPGLRGM
GYGMVTIPTIINFQYVVIMAYGMHFMFSGFRANLPWSSCDHDYNTVNCYSVLQAADCNLD
TQAFYNMECTNATEFCSMASNGAFFFEDDNPGYCTDGSTSIPFQDVTYRASSSEEYWYNR
VLNLNVTNGHVVTEVNSWSKWGGMRWEILGCLALSWMLICGSLIKGVQSYGKVVYFTTLF
PYVVLAAFLIYIGTKDGFVEGVKYYIVPQDWADMGQVSVWNAAAGQIFYSLGVAVGSQLL
LSSYNGFKTNCHRDALLIGLGNSLTSLFAGFVVFGGLGYIAHEKGVDIKDVIESGPGLVF
IVFPEVIAMMVPSPLFSFLFFLMLNLLAISSVCGSWEAFVASIFDEFPHLRKNRLWVMII
TCFGGFLCGVAMCFDSGFLLFDMMNDRCSNAILLMALIELIACSWFYGSGKILKHVEEMG
MKIPVFMKWFWWICWTIVTPIIIAVVTILSWINAAGDEFLDYTFPTWVTVIGWGLELVAV
FILVLVSIATIIKRIVAKKPWALIKPGPLMLPNKHWGPRADSGLPTGNTGKDNDGYEDD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaagagagttcgaaatcgaggtcctcttcgatagaagaagctatcaaagaa
gtggtgaaagatctggagaacatcgaacaaggaggtggcaatcccaatgaaagaggagaa
tggggaaatcattgcgagttcttcttatccagtctcggtctcgccgtgggcctcgggaac
atctggaggttcccatacgtttgctatgaaaatggcggcgccgctttcttgattccctat
atcatcatgctgttcatcgtgggattgcccatgttcttcttggaaatggttctcgggcaa
tacgcaggattgagttgtaccaaaatcttcgcccgaatgacccctggacttcgtggcatg
ggatacggaatggtgaccattcccaccatcatcaactttcaatatgtggtcatcatggcc
tacggaatgcacttcatgttctccgggttcagagccaaccttccttggagttcctgtgac
cacgattataacacggttaattgctacagtgtgttgcaagcggctgattgcaatctcgac
acgcaagccttctacaacatggaatgcaccaatgctaccgaattctgttctatggcttct
aatggagccttcttcttcgaggatgataaccccggctattgcactgatgggtctacctcc
attccatttcaagatgtaacctatcgagcttcgtccagtgaagagtattggtacaacaga
gtgctcaatttaaatgtgacaaacggacatgtggtgaccgaggtgaactcgtggagcaaa
tggggtggaatgcgatgggaaatcctaggttgtctggccttatcatggatgcttatttgt
gggtccttgatcaaaggagttcagtcttacggaaaagtggtctattttacaacactgttt
ccctacgtggttttggccgcctttctgatctacatcggtaccaaagatggatttgtggaa
ggcgtaaaatactacatcgtgccccaagattgggccgatatgggccaagtgtctgtttgg
aatgcagcagctggacagatcttctacagtttgggcgtggctgtgggcagtcaattgctt
ctttcgtcctataatggcttcaaaaccaattgccatagagatgccttgctgattgggctt
ggaaattcattaacatccctgttcgccggattcgttgtctttggtggattgggatacatt
gctcacgagaaaggtgtcgatatcaaggacgtcatcgagtctggtccgggtctggtgttc
atcgtcttccccgaagtgattgccatgatggtgcccagtccccttttctcgtttttgttc
ttcctcatgttaaacttgttggccatttcctctgtgtgtggatcctgggaggccttcgtg
gcgtccattttcgacgaatttccacacttgcgaaagaatcgattgtgggtgatgatcatc
acgtgttttggcgggttcctctgtggtgtggccatgtgcttcgactctgggttcttactc
tttgacatgatgaatgaccgttgctccaatgccattctattaatggccctcatcgagttg
atcgcctgcagctggttctacgggtcgggtaaaatcctgaagcacgtggaagagatgggc
atgaaaattcccgttttcatgaaatggttctggtggatctgttggaccatcgtcacccct
atcattattgcagtcgtgaccatcttgtcttggatcaacgcggccggcgacgagttcttg
gattatactttccccacgtgggtcactgtgatcggttggggcttggaacttgtggctgtc
ttcattctcgtactggtgtccattgccaccatcattaagcggattgtcgccaaaaagccc
tgggcactcattaagcctggccctcttatgctacctaacaagcactggggtccccgggcc
gatagtggattgcccacgggcaacacaggcaaggacaacgacggttatgaagacgattga
DBGET
integrated database retrieval system
