Tigriopus californicus (tidepool copepod): 131876890
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Entry
131876890 CDS
T09700
Name
(RefSeq) protein white-like
KO
K21396
ATP-binding cassette, subfamily G (WHITE), eye pigment precursor transporter
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131876890
Transporters [BR:
tcf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131876890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
AAA_29
RsgA_GTPase
SMC_N
nSTAND1
AAA_28
MMR_HSR1
AAA_22
AAA_30
nSTAND3
AAA_23
AAA_16
AAA_25
ABC_ATPase
Dynamin_N
DUF87
Motif
Other DBs
NCBI-GeneID:
131876890
NCBI-ProteinID:
XP_059078410
LinkDB
All DBs
Position
2:complement(4093392..4096742)
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AA seq
684 aa
AA seq
DB search
MPTFHVRIYVYPFSLVFRCPFLKKAPELARHLNFAIAGAVSCCIWLWTIGHFLSSQALIP
PSHPCSHPPLLAKFRDPVRPRSCSRGHTNCIVSVPPTAMDPPEAQPFVGPTLSVGLTYSW
QNLCAQVPLARKSALGSCWSRRSSSPTLSDPGANEALNWPWRESGKVVLDHVSGIVEQGD
VCAILGASGAGKSTLLNALTMRNVDALEISGERYCNAELVTPESLTAQSAYVQQDDMFIG
TLTVREHLQFQARVRMDRQFNAKERMARVKEVIQHFGLDNCADVLIGVQGRIKGISGGES
KRLALASEVLTNPLLMFCDEPTSGLDSYMAQNVVETLKNMAGEGKTVIITIHQPSSQVFE
MFNKVLLLANGRVAFHGSRENAEGFFRSMNMIVPQYFNPADFYVQKLAMVAGKREESEAQ
IQQICDTFQSSTWGSQLSDKLDKNASPDASASQPSTRVAISKYKVSWWQQFSALMTRTYL
ATIKEPLIAKVKIMSTLVVSLVLGFIYYGQKHDQAGIMNINGAIFIIITNLSFENIFAVI
MVFCNELPIFLREHANGMYRTDVYLICKQLVETPVFIITTTITVVILYWMTGMNPDPIRF
LGALGIALLLTQVIVSFGYMISCIVPNAQVGNDISPVLILPFMLVGGFFLNNLSIPTWLI
WLKYISWFKYANECLVINQWSGVE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttttcatgtccggatctacgtttacccattttccctcgtctttcgttgccct
tttctgaagaaagcgccagaattggcccgccacttgaattttgccatcgctggcgccgtc
agttgttgcatttggctctggaccatcggacatttcctttcatcccaggctctcatacca
ccctcccacccgtgcagccaccccccattgttggcgaaattcagagacccagttcggcca
cggtcctgctcgcggggtcacaccaactgcatcgtttcagtcccacccacggccatggat
cctcccgaggcccaaccctttgtcggtcccacccttagtgtgggtctgacctattcgtgg
cagaatctgtgcgctcaagtgcctttagcccggaaatcggccctgggaagctgctggtcg
cgaaggtcatccagtccgaccctgtcggatccaggggcgaacgaggccttgaattggcct
tggcgcgagagtggaaaagtggttttggaccatgtgagcgggattgtggaacagggcgat
gtgtgcgccattctgggcgcttccggagcgggcaaatccacgctgctcaatgccctgacc
atgaggaatgtggatgccttagagatcagtggcgaacgatactgtaatgctgagttggtc
acgcccgagtctttaacggctcaatcggcttacgttcaacaggacgacatgttcattggg
accttgaccgtacgggaacaccttcagttccaagcacgagttcgaatggatcgacagttc
aacgccaaagagagaatggctcgcgtgaaggaggtgatccaacattttggcttggataat
tgcgctgacgttctgattggcgtgcaaggaagaattaagggaatttccggaggcgaatcc
aaacgactcgctcttgcctccgaagtgttgaccaatccgttgctaatgttttgtgatgag
cctacttccggattagactcgtacatggcgcaaaacgtggtcgaaaccttgaagaatatg
gctggagaaggcaagacggtgataatcaccatacatcaaccctcatcgcaagtatttgaa
atgtttaacaaagtccttcttttggctaacggacgagtggctttccatgggagtcgcgag
aatgccgaaggattcttccgttccatgaacatgatcgttccccaatatttcaatccagcc
gatttctacgtccaaaaactggccatggtggcagggaaacgtgaagagtctgaagctcaa
atccaacagatctgtgacacgtttcaatctagcacatggggatcgcaattaagtgataag
ctagacaagaacgcgagtccggacgcgtccgcttcgcagccttcgaccagagttgccatt
tccaagtacaaggtcagctggtggcaacagttctcggccctcatgacccgaacctactta
gccaccatcaaggagcccttgattgccaaggtcaagatcatgtcgacgctagtggtctcg
cttgttttgggcttcatctactacgggcaaaagcatgatcaagccgggatcatgaacatc
aacggcgccattttcatcatcatcacgaatctctcgttcgaaaacatctttgccgtcatc
atggtgttttgcaatgagctgcccatctttctccgcgaacacgccaacggaatgtatcga
accgacgtgtacctgatttgtaaacagctagtcgagacccctgttttcatcattaccaca
actattacggttgttatattgtactggatgaccgggatgaatccggatcccattcgcttt
ttgggtgctctaggaatcgcgcttttgctgacccaagtcatcgtgtcgtttggctacatg
atctcttgcatcgtacccaatgctcaagtgggcaatgacatctctcctgtgcttatctta
ccattcatgctcgtggggggtttcttcctcaacaatctctccatccccacttggctcatc
tggctgaaatacatctcttggttcaaatatgccaacgagtgcctagtcatcaaccaatgg
agtggggtggaatag
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