Tigriopus californicus (tidepool copepod): 131876891
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Entry
131876891 CDS
T09700
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131876891
04082 Neuroactive ligand signaling
131876891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131876891
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
131876891
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GFIT
Motif
Pfam:
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
T4SS_pilin
MpPF26
Motif
Other DBs
NCBI-GeneID:
131876891
NCBI-ProteinID:
XP_059078411
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Position
2:4061552..4077463
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AA seq
491 aa
AA seq
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MMRLLVLWGTLLMVQAQVPSRDVTYPTFRVASIMAPPFLQQQDGDSTQLRGNDQYKGFIK
DLLDELGRMMGFQYTIVLSEDNRYGVPLDNGQWNGLVGMVQDNKADFVAADLTVTSQRHD
ALDFSRPFMTAPITIVTKKSSSLFGGGMFDFFIPFTEDLWLLLGVAYVITALLLFLIARI
SPYEQWSEVFHVFNLSNSFWFKFSCFFRGSNYTPKTVSTRLLTAGWYLFGISILVVYAIG
LNGFIRAEFEGTQFLVPSIEALLGDSSFQIGVIQGGSTETMLQNSGIPIHQEIYERVVED
PENNQVGSYVEGIQKVLEGEGNFGLIMEGNAADYFKGENCDLYSVGALSNKQYAFGFPIG
SRYRSALSTGLLRLRESGRLQQLISKWWASAGNCARESVKQVEGSGVCKEVAIPLNLGNL
AWAFIILAIFLLVSLIVAIVELVLFVKKHPSAEKNGARITKQLKYAFCGCCLKTATNPMQ
PPFAFSQASQT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgttagtgctttggggcactctacttatggttcaggcccaggtgccttcc
cgagatgtcacatatccaacctttcgggtggcttccatcatggccccaccgtttttgcaa
cagcaagatggtgattcgactcaattgcgaggcaacgatcaatacaagggcttcatcaag
gatcttttggatgagttgggcaggatgatgggtttccaatatacgatcgttctgtccgag
gataatcgatacggggtgccccttgacaatggccaatggaatggattggtcggcatggtt
caggacaataaagctgactttgtcgcagccgatctgacagtcacttctcaaagacacgat
gctttagacttttctagacctttcatgacagctccgatcaccatagtcaccaagaaatcc
tcctcgctttttggcggaggcatgttcgatttctttattccattcaccgaggacctgtgg
cttctcttgggagttgcatacgtaatcacagccttgcttctattccttattgcccgaatc
tctccttatgagcaatggtctgaggtgttccacgtgttcaacttgtccaattcgttttgg
tttaaattctcgtgcttcttcaggggatcaaactacaccccaaagactgtgtcaaccaga
cttctcaccgccggatggtatctttttggaatctccatactcgtggtctatgccatcggc
ttaaacggctttattcgagccgaattcgagggaacacaattcctggtgcccagtattgaa
gccttattgggcgactcttcattccaaattggggtcattcaaggcgggtccactgagaca
atgctacaaaattctggcattcccatccatcaagagatctatgaacgtgtcgttgaagat
cctgagaataaccaggtcggatcatacgttgagggcatccaaaaggtccttgaaggcgag
ggaaactttggattgatcatggaaggcaatgccgccgactacttcaaaggagaaaattgc
gacctgtatagcgtgggagcactctccaacaagcagtatgctttcggtttccccattggc
tcgcggtatcggtcagctctttcaactgggcttctaagacttcgcgagtccggccgattg
caacaactgattagtaaatggtgggcatccgcgggtaattgtgctcgagaatcagtgaag
caagtggaaggaagtggagtctgcaaagaggtggccatccccttgaatctaggaaatctc
gcttgggctttcatcattttggccatattccttctggtttctttaattgttgccattgtc
gagctggttttatttgtgaagaagcatcccagtgctgaaaagaatggtgctaggatcacc
aaacagttgaaatatgccttttgtgggtgttgcctcaaaactgccaccaatccaatgcaa
cccccgtttgctttctctcaagctagccaaacttga
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