Tigriopus californicus (tidepool copepod): 131876930
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Entry
131876930 CDS
T09700
Name
(RefSeq) glutamate receptor ionotropic, kainate 2-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131876930
04082 Neuroactive ligand signaling
131876930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131876930
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
131876930
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
131876930
NCBI-ProteinID:
XP_059078456
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Position
2:complement(7624109..7647124)
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AA seq
1001 aa
AA seq
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MKTSTQLCSNMKMLILLASTLPLVLARAPLSLRLGSVFLAGDSRMHESFRQTVRAINDNP
NLLNTTRVDTDLQYAKADRYDAYQRICTEVQYSVMAVFGSSDREVDTSVASVCSALHIPY
LTTGTSFALEDNIGKYTVQMGPQATHLVQAVHSLVVTLGWKDMAFIVHRKTGSLDPSLLI
EQLQVSGVNVHVLELVREDIRPDLVLLRQRGIERFVVDLTSSLLETFFDQAMKSGIVHTS
ASFILADLDFMSVSLNSVTQTGANVLGFSLVDQNRLREAMASGKISNDLGGLLLETYKAA
LMYDAVHMFANAVEYVAQAEDIVSPRVKCNDPDAPYELGPKFIEALEAVSFDGFSSHPGT
PITLKPSGPKEGLVRTEISMDVVRLLESSGARVTIGEWNWSQPSGSQILVNPKDLEKLQN
RHPQVAMRQKNQKLKDLVIQAHEDSDFPLLNVRRDVKGNVLGFEGLLIDLINKLAKDLNF
NYTLRFSSELGRKRNGNWTGLIKKLTDREADVGLAALPQARKYSPAIAFSPPIATSHLTL
MIQRPDRTHRSQVSEEPSISTRRTLVSFLDPFPASLWLSIVVAFIITSLLLFLVGRISPY
ERRASQDSSCFGDGLGLCSSFWFTLTGFFLRGTTVQPKSISARFLSAIWWIFCLCILILY
ITSFYSRFFGRQSETPTTNKGGSFTGNNYQPSLDRVLRGNPDFKVGAEPEIRKILEMSND
PLHQRLRQHLDPDLEFDNPLEASRAVVKTPNLGFIVESVQADILLKENCHLTTVGDLGQK
FYGIAFPLESSLNTVLSEQILKYAEDGTLVSLQSKWLVDMEQTCEAKFGTGQFDQQYQTT
PPYQVITNNSWSNDGEYLTCGQVEGPFLMLLICGILSVLIAIAELIIFSLISSRQRRLAC
PPSSPIHNGSLSHHHHYSQSPGSILKEEIRSMFQCAQPATLSSSLNSSNNGHHGNYRING
SGEVPSPNGSPFKNNSSSYFQQTQALLRKDNSSPEDANSQL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatctacccaattgtgttccaacatgaaaatgttgatcctgctagccagtacc
ttaccattggtattggccagagctccgctgtctctcagattagggagtgtctttctggcc
ggagactcgaggatgcacgagtccttccgacaaacggtccgagctatcaatgacaatcca
aatttgctgaataccacccgagtggacacagaccttcagtacgccaaggccgatcgttat
gacgcttatcaaaggatttgcacagaagtccagtatagcgtgatggcggttttcgggagc
tcagatcgggaggtcgatacgagtgtggcctcggtttgttcggcacttcacattccctat
ttgaccactggaacttcgttcgcattggaggacaacattgggaaatacacggtgcaaatg
ggcccacaagcgacccatttggttcaagctgtccattcacttgtggttacattgggctgg
aaggatatggcctttatcgttcaccggaaaacgggatccctggatccgagccttctaatt
gagcaactccaagtgagcggtgtgaatgtccatgtcttggaattggttcgagaagacatc
cgacccgatctggtcctgctacgacaacgaggcatcgagcgatttgtggtcgacttgacc
tcgagcctcttggagacctttttcgatcaggccatgaaatccggcattgtccacacgagc
gcttcgttcatcttggcggatctggatttcatgtcggtgagtctgaactctgtgactcag
acgggagccaatgtcctggggttctctcttgtggatcaaaatcgactgcgtgaagccatg
gccagtgggaagatttcgaatgatttgggcggtctcttgttggagacgtacaaggcagca
ttaatgtacgacgctgttcacatgtttgcgaatgccgtcgagtacgtggcgcaagctgag
gatatcgtgagtcccagagtcaaatgcaacgacccagatgccccatacgagttgggtccc
aaatttatcgaggcattggaggcggtcagttttgatggcttttcgtcccaccccggaact
cccataactctgaaacccagtggccctaaagaaggtttggttcggacggaaatctcgatg
gatgtggttcgcttgctcgaaagctctggggcacgtgttacgatcggagaatggaattgg
agccagccaagtggaagtcaaatactggtgaatcccaaggaccttgagaaattgcagaat
cgccatcctcaagtggccatgagacagaagaaccagaaattgaaggacctcgtcattcaa
gcacacgaggattcggattttcctctgttgaatgttcgccgtgatgtgaagggcaacgtg
cttggatttgagggtttactgatcgacttgatcaacaaactggccaaggatctcaacttc
aattacaccctcaggtttagttctgaacttgggcgaaaacgaaacggaaattggactggt
ctgatcaagaagctaactgatcgggaggccgatgttggtttagcggcactaccacaagcc
aggaagtacagcccagccatcgcattctcaccaccaattgccacttcgcacttgacgctc
atgattcagcgtccagaccgaactcatcgatcccaggtctcagaagagccctcaatctcc
actcgacgaaccttggtctccttcttggacccgtttccagcatccttgtggttgagcatt
gtggtggcatttattatcacgtcccttttgctcttcctggtgggtcgaatatcaccttac
gagagacgtgcgagccaggattcctcttgctttggcgatggactcggtctgtgtagctcc
ttctggttcactttgacgggattctttcttcgtggtaccaccgttcagcctaagagcatt
tcagcacgtttcctttctgcaatttggtggatattctgtttgtgcatcctgatcctgtac
atcaccagtttctacagtcgcttctttggacgtcaatccgaaacgcccacgacaaacaag
ggcggatccttcaccggcaataactaccaaccctcgcttgaccgagtgcttcgcggtaac
ccggatttcaaggtcggagcggagccagaaatacggaaaatcttggagatgtcgaatgac
ccgttgcatcaacgtctgcgccagcatcttgaccctgatctggaatttgacaacccctta
gaggcctcccgagccgttgtcaagacgcccaatctaggatttatcgtcgagagcgttcag
gcagatatcctcttgaaagaaaactgccatctgaccacagtgggagatctgggacagaaa
ttttacgggatcgcctttccgttagaatcgtcgctaaatacggtgctctccgagcaaatc
ttgaagtacgcagaggatggaacattggtctctctgcaatccaaatggttagtagacatg
gaacaaacgtgtgaggccaagttcgggacaggacaatttgaccagcaataccagacgacc
ccgccctaccaagtcattacaaacaactcgtggagcaacgacggtgaatacttaacatgt
ggacaagttgagggtccattcctgatgctgttgatttgtggcatcctctccgttttaata
gccatagccgagttgataattttctccctgatctcatcgcgacaacggcgactagcttgt
cctcccagttctcccattcacaacggctccctttcccatcatcaccattattcacagtca
cctggatctatcctgaaagaggaaatccggagtatgttccaatgtgcccagccagcgaca
ctttcttcaagcctgaattcatccaacaatggtcaccatggcaactatcgaattaacggg
agcggagaagtgccctctccaaatggaagccctttcaagaacaatagtagctcttatttt
caacaaacgcaagcactgttgaggaaagacaattccagtccagaagatgccaattctcaa
ttgtga
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