Tigriopus californicus (tidepool copepod): 131877014
Help
Entry
131877014 CDS
T09700
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tcf01001
]
131877014
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131877014
Enzymes [BR:
tcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
131877014
Protein kinases [BR:
tcf01001
]
Serine/threonine kinases: Other
Other
131877014
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131877014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
EIF3I
LisH
WD40_WDHD1_1st
ANAPC4_WD40
LisH_PAC1
Beta-prop_EML_2
Ribosomal_L22e
WDR55
WH_RGF3
Motif
Other DBs
NCBI-GeneID:
131877014
NCBI-ProteinID:
XP_059078550
LinkDB
All DBs
Position
2:8267784..8274664
Genome browser
AA seq
1509 aa
AA seq
DB search
MASSGSSSDSSASDSSQMDDPSLDPRLLARTQPDPETEAHLEAFQAAVRAWEEAKSQPPF
DPTGHILQMVTLFEKASGSYFARDPDPFEVRHPSRVIPECALGQLLKIYFKKESLVQDLL
NSYMRDNYWTRTGQTKDAFDLNVAACRLIIAITPGLELSVLSNTDGLISQLFRWVDKAAE
PLLSYATVVLASAMEITAVATEPDNREKSFKLVPTLVKRMRAHILESQTAQESFKRPFVH
LGSQSTSQPLGRGVKRKSTDTGEGEAEKSQSGLASPSTHQNGDWSNSSWTEVESQILGQF
SFHPLDTTGKMVAILRFLTPLAEYQEFLAHIHELNGVQDIFDWCLNMRDTKNARLAFEAL
KFLTALFCHKKFVTEWVNKDHIQQLLSIPRPSIASTAVSQCLFYLSCDDDSMEKVCLMPE
HLQIRLVKYVLWLMECSHDTGRQFGVMFFGMSAAFRKLLELYDKEGGQRKVFNTISTLRV
LNPDDDDMLILTDDEEYTQRQKLRHAMVALKKYFEAHLALKCEQLKRSMGYDPAQSPQPV
IVSYKPIRLTSEQVYERVSSLMKHMPFRSRWGPVDEFINLDGVSTCLQIIAMAYDWTFTG
RSEMVRCALDVLAICCVVPKVQLQLCERIELYDETKTVGINIVLGAAEGDIVQDSADVRK
SALTLIINCVCAPINRPGIQTRHALNSSTVTTTPASHRRKAIGKSSEDLINKVWDCCRSN
NGIMALLELLSIKTPITDADAIRALACKALVGLARSDAAKQIMSKLPIFINGQLQQLVRE
PILQDKRTEHYKFQQYAHELMEIVSTGEGQVHRLARGNDFSVEMLHRASVVAQTKIRFSK
KQLLQLIQEYLASEGLSDSAAVLQREANIAVLNAPSNRSLIHRSVNNTPNPLVTPTTPHR
PLSSTSSLNRALASPPASSSMNRSLFDAPGTPSSPPSSGVKPSESSAVSTPNIPIRINRN
RGGRHDTPIVGLGTPASSSKNIQRACEPFSLPNASEFNQGTSEKKVTLVSIVSDYLFSQH
SLCKNPMTTCPEFDLLIPHKCPDPRPKNAAPMNFSLRHSRKEVWPPFGGPEGGKLDRQLI
YSRFKPSKSFKLEPRDENTSTTFSSCAFMPDDSFLLAGTSTGDVKMFNMATGSEEGSFAC
HQTILFHLQPNREGKLLLTSSAWRIPYSGLWSLGEFFENKMNFNHDEYVEFSNVHQDKVI
GTKGEKAKIYDINTQKVIMELNPAISNNYSMNRATFDPFDDLILNDGVLFDSRSGKEIRK
LDKLNQTLSGVFHPNGLEIISNTEVWDLRTFHLLKTVPGLDQCTVKFSNSGNIIYAVTMQ
EEEPDGEEKFESAFRTFDASDYSSIATIETRRAVVDLATSHFDLQLAVVENSNIPTHEES
VVRLYDVGQIRSEEDEAEDDDNDGDEGDEDDSDDGDGGFNFFTDDDDDEDDYDDEDDDDD
DDEDMIMLDEDDDGNEDNAEPEAGPQEPAVAALEEQQVANGQEGDTDNPVEIESDDGSWE
DVDEEVSIG
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcaggttcgtcatcggattcgtcggcctcggattcgtcgcaaatggacgac
ccctcactggatccccgcctcctggctcgcactcaacccgatcccgaaactgaggcccac
ttggaggcctttcaggcggcggtcagggcctgggaagaggccaaaagtcaaccgcccttc
gacccgaccggtcatatcctccaaatggtgacgctctttgagaaggccagtggcagttac
tttgcccgtgatcccgacccgtttgaagtgcggcacccgtcgcgcgtgatcccggagtgc
gctttaggccagttgctgaagatctacttcaagaaagagagtctggtccaggatctgctc
aacagttacatgcgcgataactattggactcgcaccggacagaccaaggatgcattcgac
ttgaacgttgctgcttgtcgactcatcatcgccatcacccccggtttggagttgagcgtg
ctgtccaataccgatggtctcattagccaattgtttcgttgggtggacaaggccgccgaa
cccttgctctcgtacgccacggtggttttggccagtgccatggaaatcactgccgtggcc
accgagcctgacaatcgcgagaagagcttcaagctcgtgcccactctggtcaagcgtatg
cgtgcccacatccttgagtcgcagaccgcgcaggaatccttcaaacgacctttcgttcac
ttgggcagccaatcgacctcccaacccctcggtcgcggtgtgaaacggaagagcacggac
acgggggaaggcgaagccgagaagtcgcagtcgggattggccagtccgtccacgcatcaa
aatggcgactggtccaacagttcgtggaccgaagtcgagtcgcagatcttgggccagttc
tcgttccatcccttggacacgaccgggaagatggtggctatcttgcgatttctcacacct
ttggccgaataccaggagttcctggctcacatccacgaactgaatggtgtgcaggacata
tttgattggtgtttaaacatgcgggacacgaagaacgcgcggttagcctttgaagccttg
aagtttctcaccgctctgttctgtcataagaaattcgtgacggagtgggttaacaaggat
cacatccagcaactcttgagcattcctcgaccttccatcgcttccacagccgtcagtcaa
tgtctgttctatctctcgtgtgatgatgactccatggagaaagtttgtcttatgcccgag
cacctccaaatacgattggtcaagtatgttctctggttgatggagtgttcccatgacacg
ggtcgtcagttcggagtcatgttcttcggcatgtccgccgcttttcggaagctcctcgag
ctctacgacaaggaaggtggtcagcggaaggtgttcaataccatcagcaccttgcgcgtt
ctcaatcctgacgatgacgatatgttgatcctgaccgacgatgaagagtacacgcagcgc
cagaaacttcgacacgccatggtggctttgaaaaagtatttcgaggcccatcttgccctg
aaatgcgagcaattgaaaagaagtatgggctacgatccagcccaatcaccccaacccgtc
atcgtgtcctacaagccgattcgattaacatcggaacaggtgtacgagcgagtcagtagt
ctcatgaagcacatgccgttccgatcccgttggggtccggtggacgagttcatcaatctg
gacggcgtctccacgtgccttcaaatcatcgccatggcttacgattggacgttcacaggc
cgctcagagatggtgagatgtgctttggacgttctggccatttgttgtgtcgtccccaaa
gtccagcttcaattatgtgagagaatcgagctctatgatgagacaaagaccgttgggatc
aacattgttttgggagccgccgagggcgatattgttcaggattctgctgacgtgaggaaa
tctgcattaacattaataatcaactgtgtttgtgccccaatcaatcgccctggaatccaa
acgcgacatgcgctcaacagctccactgtcaccacaactccggcttcccatcgtcgaaaa
gcgatcggaaaaagctccgaggacttgatcaacaaagtctgggattgttgtcgttccaac
aacgggatcatggctctcttagagctattgagcatcaagaccccgatcactgatgccgat
gccattcgagctctggcttgtaaagccctcgtgggtttggcccgatccgatgctgccaag
cagatcatgtccaaattgcccattttcattaatggccaactccaacaattggtccgcgag
cctattctgcaagataaacgaacagagcactacaagttccaacaatacgctcacgagctc
atggaaatcgtgagcacgggcgaaggtcaagtgcatcgattggctcgaggcaatgacttt
tcggtcgaaatgctacatagagcctcggtggtggctcaaaccaagatccgattctccaag
aaacaattgctccaactcatccaagaatatctcgcttccgagggattgtcagattcggct
gcggttcttcaacgtgaagccaatatcgctgttttgaatgcgccgagtaatcgctcgctc
atccaccgatcagtcaacaatacgcccaaccctctggtcacgcccaccactcctcatcga
ccgctatctagcacttccagtttgaaccgcgctctagcttctcccccggcttcctcgtcc
atgaatcggtcgttattcgacgccccaggaacgccctctagcccgccctcttcaggtgtg
aaaccttctgaatccagcgctgtgagtacgcccaacattccgattcggatcaaccgtaac
cgtggtggacggcatgacacgcccatagtgggtctggggacccctgcctcgtcatcgaaa
aacatacagagagcttgtgaacccttctccctgcccaacgcaagtgaattcaaccagggc
acctcggaaaagaaagtgaccttagtctccatcgttagtgattatctgttcagtcagcat
tcgttatgcaaaaaccctatgaccacatgcccggaatttgatttgctcatcccgcacaaa
tgccctgatccgagacccaaaaacgccgctcccatgaacttctctctccgacattcgcgg
aaagaggtgtggcctccttttggcggtcctgagggcggcaaattggaccgtcagttgatt
tatagtcgtttcaagcccagcaagagcttcaaattggaacctcgagatgaaaatacctcg
accactttctcaagctgtgcatttatgcctgatgatagttttcttttggctggaacctct
actggtgatgtgaagatgttcaatatggccactggaagcgaagaaggctcgtttgcttgc
catcaaaccattctctttcaccttcaaccaaatcgcgaaggcaaacttctactcacatcc
tctgcatggcggattccatattcggggctttggtcgttgggcgagttctttgagaataag
atgaacttcaaccacgacgaatatgtagaattctccaatgttcaccaagataaggtgatt
ggtaccaaaggcgaaaaggccaagatctatgatataaacactcaaaaagtcatcatggaa
ctgaatccggccatttccaacaactattcgatgaatcgtgccacttttgatcccttcgac
gatcttatcctcaatgatggagttctctttgattcccggagcgggaaagagatccgtaag
ttggacaagctcaaccagactctctcaggagtgtttcatcccaatggtttggagatcata
tccaacaccgaagtttgggatctgcgaacatttcacctgttaaagaccgtcccgggctta
gaccaatgcacagtgaagttctccaattctggaaacatcatttatgcagtcacaatgcaa
gaggaagaacccgacggcgaggaaaagttcgaatcggcttttagaacgtttgacgcctcc
gattattccagcattgctacaattgaaacccgaagggccgtggtagatttggccacgtca
cattttgacctccagttggctgtggtggagaattcgaacattccgactcatgaggaatct
gtggtcagattatacgatgtgggtcaaatccgatctgaagaggacgaggctgaggatgat
gataacgacggagatgagggtgatgaggacgacagtgacgatggtgatggaggcttcaac
ttctttacagacgacgacgacgacgaagatgattacgatgacgaagatgacgacgacgat
gatgatgaagatatgattatgttggatgaagatgatgacggcaatgaagataatgccgaa
cctgaggctggacctcaagagccggccgtggccgcgctggaggagcagcaagtcgccaac
ggacaagaaggagacacggataatcccgtggaaattgaatctgatgatggttcttgggag
gatgtggatgaggaagtaagcataggttga
DBGET
integrated database retrieval system
