Tigriopus californicus (tidepool copepod): 131877042
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Entry
131877042 CDS
T09700
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131877042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131877042
Membrane trafficking [BR:
tcf04131
]
Endosome - Golgi transport
Others
GGA
131877042
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF2096_N
Peptidase_S46
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
131877042
NCBI-ProteinID:
XP_059078589
LinkDB
All DBs
Position
2:10608700..10611039
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AA seq
647 aa
AA seq
DB search
MTSEALESLLFKATNPSNKIEDVNTIKKFCDTVRNTKEGPSIACKLIAHKIQSPQEREAI
QTLAVLEACVKSCGEAFHIEVGKFKFLNEMIKLVSPRYLAGRTPDHIKKKIIELLFLWTK
DLGNEGKIKEAYEMLKKQGIVTEDPIYVGGAVFASSLPPRPDAPLTQAQTQELKKLLQSK
NPEDLEKANTIIKGMVKEDERKMDQLTRRSTELIMVNNNSKLLNEMLDHFEKARSTPQEL
ELLKDLQESCEKMQPKLFRLASDTDEDDETINEILQASDELSKVLDRYRMVIVQGKPDII
KRQGYLSEGRSSNPGNSNSDALLDLGPIPSESKPSSHSIVDDDILGLESAFQASSSPKTT
PVQIKTIAPSIDDLLNGSPPLDSGEPSLIMGSNSSSSASLSSKANPLDPFAQKMEAKKAS
RQRGLEALDLLGETALKSHLTSRSPQFEKRCEKVPMSKMIDHRRELDLTASLTEPVAPSS
RSPVTDSPTTVDIPKPPEIQVQKPKEEPPFKLSDLEVAISSIKPRKSPPITLQDSEDGIS
ILLNFGQDQPREHVTAIVVTIINKSPEAITDLEFKAVVPKGCKVKLQTASGQSLPAHNPF
VPPSAITQVMLVANPKQISPVSFKYVLSYNQDDDPQTELGEIKSLPL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgaggccttggagtccttgcttttcaaggctaccaacccgtctaataagata
gaggatgtgaacaccatcaagaagttctgtgatacggttcgaaacacgaaagaaggaccc
tcgatcgcgtgcaaattgatcgcgcacaagattcaatcgcctcaagaacgtgaggccatt
cagactttggccgttctcgaggcttgcgttaaatcttgcggcgaggcctttcacatcgag
gtcggcaagtttaagtttctcaatgagatgatcaaattggtgtctccgagatatctggcc
ggccgcacgccggatcatatcaagaagaagatcatcgagctcctgttcctttggaccaaa
gacctggggaatgagggcaaaatcaaagaggcttatgagatgctgaagaagcaagggatt
gtcacggaggacccgatttatgtgggcggggctgtgtttgcctcctcactaccaccacgc
ccggatgcgcctctgacgcaagctcagacgcaagagctgaaaaagctcctccaaagcaag
aatcctgaggatctggagaaagctaacaccatcatcaaaggcatggtcaaggaggatgag
aggaagatggatcaactcacgaggagatccacggagttgatcatggtgaataataattcg
aaattactcaacgagatgcttgaccatttcgagaaagccaggtccactcctcaagagttg
gagttactcaaggacttgcaagaatcgtgcgagaagatgcaacctaagctgttccgattg
gcctcggataccgacgaggacgacgagaccatcaacgagatccttcaggccagcgatgag
ttatccaaggtcttggatcgctatagaatggtcattgtccaaggaaaaccggatatcatt
aaacgacaaggatatttgtccgagggtagatcttcaaacccgggaaattcgaactctgac
gccttgctagatcttggacccattccatctgaatcgaaaccttcatcacattccatcgtg
gacgacgacattttaggcttggagagtgccttccaagcgagttcgagtcccaagacaact
cctgttcaaatcaagaccatcgctcccagcatcgacgacctgttaaatggctctccacca
ttggacagtggggagccatcgctgatcatgggttcgaactcgagttccagcgcttcactg
tcctcgaaagccaaccctttggatccctttgctcagaagatggaagccaaaaaagcctcg
agacaacgaggtttagaagcactcgatttgttgggcgaaaccgcgctcaaatcccacctg
acctcaagaagtccgcaatttgagaagagatgcgagaaagttccaatgtccaagatgatc
gatcaccgccgagaattggatttgacggcctccctgaccgaaccagtggctccaagttcc
cgaagtccggtcacggattctcccaccacagtagacattcccaaaccacccgagatccaa
gtgcaaaagcccaaagaggaaccccccttcaaactgtctgatctcgaggtggccatatct
agtattaagcccagaaagtctccgcccataacattgcaagactcggaggacggtatctcg
atcctgttgaactttggtcaggatcagcctcgggagcatgtgacggccattgtggtcacg
atcatcaacaaatctccagaagccatcactgacctcgagttcaaggccgtagtgccgaaa
ggttgtaaagtcaagctccagacagcttcaggccaatctcttccggctcataatcctttt
gtgcctccgtcagccatcacccaagtaatgttggttgccaatcctaagcaaatctcaccc
gtttccttcaaatacgtgttaagctacaatcaggacgatgatccgcaaacagaattaggt
gaaatcaaaagtctccccctttaa
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