Tigriopus californicus (tidepool copepod): 131877074
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Entry
131877074 CDS
T09700
Name
(RefSeq) solute carrier family 52, riboflavin transporter, member 3-A-like
KO
K14620
riboflavin transporter 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
131877074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131877074
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC52: Riboflavin transporter
131877074
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GFIT
Motif
Pfam:
SLC52_ribofla_tr
M_large_dom
PIG-P
Nucleoside_tran
Motif
Other DBs
NCBI-GeneID:
131877074
NCBI-ProteinID:
XP_059078615
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Position
2:4700112..4704110
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AA seq
455 aa
AA seq
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MISLNTNRSLILDGLAILFGISSWISINGLWVELPLLVDQLPESWALASYLSIIIQIANL
GPICYGIYRYAYPHKNLERYIIVGLLLVGVAASLCLILFWDRTTILAGQEHSTALFVLVF
ALSMVDCTSSVLFLPFMATFRSIYLNSYLIGEGMSGFLPAVIALMQGVGGNPYCANVTDS
VLDADGNSFVDYKEVAVYPDPRFSVEVFFVILMVMVIVSAVAFILMNVVPSVRSELVTDQ
NYIAPTEEAGSYDQVTPSGSGVKDSQSTEAPVSFPSLDSENSDWKARNKFYGFLALQAYL
CFISNGAFPSIQTYSCLPFGNVVYHLSVTLNAMANPVMAFMAFFCPCRSSKLLLGLTAAG
TLFSGFILATSLESPNQLWGPDVGGALTVLSWVIYGGLFSYVKVSIAGWCWEHSRTALFW
CGAWTQIGSAFGAALSYVLVNELNVFHQYYIKCES
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgctgaatacgaatcgcagcctgatcctggatggcttggccattctctttggg
atcagctcttggatcagtatcaatggcctttgggtggagttgccgctgttggtggatcaa
ctccccgagagttgggccctggcctcgtatctgtccatcatcattcagattgccaatttg
ggacccatttgctacggcatttatcgctatgcatatccacacaagaacctcgagcggtac
atcattgtgggcctacttttggtgggcgtggctgcctcgttgtgtttgatcttgttctgg
gacaggaccacgatcctagcgggtcaggaacattcgaccgcgctcttcgtgttagtgttc
gctctgtccatggtggattgtacgagctcagtgcttttcttgccgttcatggccacattt
agatccatctacctaaactcttacctcatcggcgagggcatgagcgggtttctgcccgcc
gttattgccctcatgcaaggcgtgggcgggaatccgtactgcgctaatgtcaccgactcc
gttctggatgccgatggcaattctttcgtggattacaaggaagtggccgtgtatccggat
ccaaggttctctgtggaagtgttcttcgtcattctcatggtcatggtgatagtgagtgcc
gtggcctttattctcatgaatgtggtgccatcggtcagaagcgagctcgtgacagatcag
aattatattgctcccaccgaggaggcaggctcgtacgaccaggtcacgccctccggctcc
ggggtgaaagatagtcaatccacggaggcccccgtgtcatttccgtctttggatagcgaa
aactccgattggaaagctcggaacaaattctacggcttcctcgcgctccaagcataccta
tgtttcatcagtaatggggccttcccgtccatacagacctattcctgtctaccctttggt
aacgtggtctaccatctgtccgtcactctcaatgctatggccaatcctgtgatggccttc
atggccttcttctgcccatgccgaagttcaaagctgttattggggttgacggcagcgggg
acgctcttctcaggattcattctggccacttcgctagaaagccctaaccaactttggggt
ccggatgtgggcggggcactcacggtattatcctgggtcatctatggtggattgttctca
tacgtgaaagtctcgattgcgggttggtgctgggaacactcaagaacggccttgttttgg
tgtggagcgtggacgcaaattggttccgcatttggtgcggccctctcctacgttttggtc
aacgagttgaacgtgttccatcagtactacatcaaatgcgagtcatag
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