KEGG   Tigriopus californicus (tidepool copepod): 131877213
Entry
131877213         CDS       T09700                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
  KO
K10839  UV excision repair protein RAD23
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03420  Nucleotide excision repair
tcf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131877213
  09124 Replication and repair
   03420 Nucleotide excision repair
    131877213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:tcf03051]
    131877213
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131877213
Proteasome [BR:tcf03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    131877213
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      131877213
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE Ubiquitin_5 N_formyltrans_C
Other DBs
NCBI-GeneID: 131877213
NCBI-ProteinID: XP_059078802
LinkDB
Position
2:complement(2094642..2097545)
AA seq 389 aa
MWLTLKNLQQETFTLEVTLDLTVKDLKALIEKEKGADSYPVSAQKLIYTGKIMVDDDPLS
KYSIDEKKFIVVMVAKVKPAPAVAPATAAVPAPPAQATAAAPPAETEMTDASAAPTPAPT
PASSETTPAESETSRTATAVPAGPVSVEAPPAGGIVMGEEYNNMVKNIMDMGYDRPQVVA
ALRASYNNPERAVEYLLTGIPPEVAADANEGPPNVAPAGPPVSRPSTESAPTGLAGSTGG
GSSSGGGQSAPRTGAEALAFLRNQEQFQQMRTLLQQNPNMLNAVLQQIGSSNPQLLQLIS
QNQEEFIRMINEPEGGGSGATPGGQEGGEGEGLLGGGGSVIQMSTQDKEAIDRLKALGFP
EHLVVQAYFACEKNENLAANFLLSQTMDD
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtggctgacattgaagaatctgcagcaagagacgttcaccttggaggtgacgctcgac
ctaacggtgaaagatttgaaagcgttgattgaaaaggagaaaggcgccgacagttacccg
gtcagtgcccaaaagctcatctacacgggtaaaatcatggtcgacgacgatcccctatcc
aagtatagtatcgacgaaaagaaattcatcgtggtcatggtcgccaaggtcaagcccgcg
cccgccgttgcgcccgccaccgcggccgtgcctgcgcctcctgcgcaggctaccgccgcg
gctccaccggccgagacggaaatgacggatgccagtgccgccccgacgccggcccccacg
cccgcctcgagtgaaaccaccccggccgagtccgaaaccagtcggacggctacggctgtg
cccgctggacctgtatccgtcgaagctccgcccgcgggtggcattgttatgggcgaggaa
tacaataacatggttaagaatatcatggacatgggctacgatcgacctcaagtggtggcc
gccctgagagcgagctacaacaatcctgagcgagccgtggaatatctgctcactggaatt
cctcctgaggtggccgccgatgccaatgaaggcccacccaacgtggcccccgctggccct
cctgtgtcccgcccctcgaccgaaagtgcccccactggcctggcgggctcgaccggtggc
ggaagtagcagtggtggcggtcagtccgctccccgcacgggcgcagaggccttggcgttc
ttgcgcaaccaggagcaattccagcagatgcgcaccctcttacaacagaatcctaatatg
ctgaatgccgtcctccagcaaatcggctcctcgaatccgcaactcttgcagctgatctct
caaaaccaggaggagttcatccgcatgattaacgagcctgagggtggtggttcgggcgcc
actcccgggggtcaagaagggggcgagggcgagggattgttgggcggtggaggcagtgtg
attcaaatgtcaacgcaagacaaagaggccatcgacaggctgaaggcgctgggtttcccc
gagcatcttgtggttcaggcctactttgcgtgcgagaagaacgagaacttggctgcgaat
ttcctcctctctcagacaatggacgattga

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