Tigriopus californicus (tidepool copepod): 131877290
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Entry
131877290 CDS
T09700
Name
(RefSeq) coronin-7-like isoform X1
KO
K18619
coronin-7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131877290
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
131877290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_4
WD40
WD40_WDHD1_1st
DUF1899
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
NBCH_WD40
MIOS_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
131877290
NCBI-ProteinID:
XP_059078879
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Position
3:5725884..5737796
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AA seq
1116 aa
AA seq
DB search
MAWRFKASKYKNAAPIVPKFENTIRDLSIGCYRSHGNFIAASAAYMAFNWDIQGSNLAVL
PVDAKGRQNKANVPLIYAHSEMVTDFKFSPFDDGLLATGSQDSNIKLWRIPSSGMPINGL
CDPELVLPEQPRRIETVNFNPNVDSVLATSSFNSISVWDIIEGKEVFNAQDHEDEVQSVA
WKQSGDLFASQSKDLQLRIFDVRSGSKVNQCLSHEGMKDSKVVWIGNSNRILTTGFSGER
LREINIRDMRNLSVPQKNLTLDMSSGILVPLFDPDTNMCFLCGKGDRNIQFIEISENEPH
IIEGLKYSGDQTKGACLVPKRSMDVMQGEVNRVLQLCDSSIVPVTWQVPRKSYREYHADI
YPETFGLESAMGPENWLQGQNQMTPTINLDPKKRPLDKLVVFQDKPLKDRPRSKDMSGVT
QNGSHSNGTPHKNGQENIGTKKDSDSSDNEFKKPNPKPRAVSRSNSNISENGSEPNIPPQ
VNKLDESPKPRPSPRLSSCNVTSQEPISVGHQSQSSIAQEPKIEPDEGLAMLRRQPSIRD
RKRMLEQNTQKSQEITTTSSSNGSTTSRPPSIRERTPSDEENKENKLGKIPEKEMVKKSE
EDDVVVELRSKNIFIANDRKSTMESDKKPEKKRPVSKMFCRVSKFKHLKGDVLIKGKFEN
LKNIGGTVPAECNFVHANADRIAVPLTGPGGKIALFETRKPGRIADGVTPVLINGTTVMD
FAFDPFDTNRLVTACDDGHVRVWNIPKGGITHQVNKSDAVFPAHADKIQIVKFHPLAKDV
IVTAAFDRTVKIWDLNNTNEPQIELEGHEDQLYSVEFSVCGRFLATVCRDGKIRLFDPRK
GSRSILEGGEIIPKKGARVVWVLDGEYLIVTGFSRQSERQVMMYRTQDLTLVNSVTLDVS
PAILVPYYDHDSSTLFLTGKGESTVTTFEVATDAPHLFPLSPYKPAGLHQGFAFLPKNVC
NVRDVEFARAYRLTSSTIEPISFTVPRVKTAFFQDDLFPDTRVTWEPTISAEEWLQGSQK
SCSRVSLKPDDMRNLSEGSGVTTTVTRTSAPQQNNNAIPNISMSGNLNSFSREMSKQKEQ
DIEKSVSTMMGDMDLKLEQDDMEGADEKDWEEEDDD
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcttggcggtttaaggcctcgaagtacaaaaatgcggcgccgatagtgcccaagttt
gagaataccattcgtgacctttccattggatgctacagatctcatggcaacttcattgct
gccagtgcggcctatatggcattcaattgggatattcaaggctcaaatcttgcggtgtta
ccagttgatgcgaaagggcgccagaataaggccaatgtcccgctgatttatgcccatagt
gaaatggttaccgactttaagttctcgccattcgatgacggtctcttagcaaccggctct
caagattcaaacattaagctctggcgaatcccgtcgtccggtatgccaataaatggtctt
tgcgatcctgaactcgtgctgcctgagcaacctaggcgtattgaaacggtgaatttcaat
cctaatgtggactcagttctggcaacctcttcattcaactcgatctctgtttgggacata
atagagggaaaagaagtcttcaacgcgcaggatcatgaagatgaagtgcaaagtgtggct
tggaagcaatccggagatttgtttgcctctcaaagcaaagaccttcaattgcgtatattt
gacgtgagatcaggatcgaaagtgaaccaatgtctgtcgcacgaaggcatgaaggactcc
aaagtggtttggattgggaattcgaaccgaattttgaccactggattcagtggggaacgt
ttgcgtgaaattaacatccgtgacatgagaaatttgagtgttccgcaaaagaacctaact
ctggacatgtcttctggaattctggttcccttgtttgatccagataccaatatgtgtttc
ctttgcggaaaaggtgatcggaacattcagtttattgaaatatccgagaacgagccccac
attattgaaggcctaaaatacagtggtgaccaaaccaaaggagcttgtctggtgcccaaa
agatctatggatgtaatgcagggagaagtgaaccgtgtcttgcaactttgtgactcgtcg
attgttcccgtaacttggcaggtcccaagaaagtcttaccgtgaataccatgctgacata
taccctgaaactttcggattggaatcggctatgggacctgagaactggttacaagggcag
aaccaaatgactccaaccataaatctcgatccaaagaaaaggcctcttgacaaactagtt
gtattccaagataagcctctgaaagatcgtcctaggtcaaaggatatgtcaggtgtaact
caaaacggctcccattcgaacggaactcctcataaaaatggacaagaaaacattgggacc
aaaaaagactccgatagctcggacaacgagttcaagaagcctaatcctaagccacgagct
gtatctcgatctaattcaaacatatccgagaatggatctgagccaaacattcctccgcaa
gttaataagcttgatgaaagtccaaaaccacgtcctagtcctcgcttgtcctcgtgcaat
gtcacaagtcaagagccaatctctgttggtcaccagtcccaatcatccattgctcaggaa
ccaaaaattgagccagatgaaggtctggccatgctaagaaggcaacccagcattcgagac
cgaaaaaggatgctggagcaaaacactcaaaagagtcaagaaataacaacgacgtcatca
tcgaatggaagtaccacttcccgacccccatccattcgtgagagaactccaagtgatgaa
gagaacaaggagaataagttggggaagatccccgaaaaagagatggtcaagaaatctgaa
gaagacgatgtcgtcgtggaattgaggtcaaagaacattttcatcgccaatgatcgaaag
tcgactatggagagtgacaaaaagccagagaaaaaacgccccgtgagcaaaatgttctgc
cgcgtttcaaaattcaaacatctcaaaggggatgtgctcattaaggggaaatttgagaac
ctgaaaaatattggcgggactgttccagcagagtgcaattttgttcatgccaatgctgat
cggattgcggtacctttgactggtccgggaggaaagatcgctttgttcgagactcgtaaa
cccggtcgcattgctgatggagtcacccctgtcctaatcaacggaacgactgtcatggat
tttgcttttgatccgtttgataccaaccgtttagttacggcttgcgatgatggacacgtt
cgggtttggaacatccccaaaggtggtattacacaccaagtcaacaagtctgatgctgtt
ttccccgctcatgcggacaagatccaaatcgtaaagtttcatcctttggctaaggatgtc
atcgtgactgcagcctttgaccgaaccgtgaaaatttgggatttgaacaataccaatgag
ccccaaatcgaactggagggccatgaagaccagttgtacagtgtcgaattcagcgtgtgc
ggccggtttttagccacggtctgccgtgatggaaaaattcgcctatttgatcctcggaag
ggatctcggtcaatcttggaaggaggcgaaatcattcccaaaaaaggagctcgagttgtt
tgggttttggatggtgaatacctcatcgtcacaggtttcagtcgccaatctgagcgccaa
gtcatgatgtaccgtactcaagatctaaccctggtgaactcggtgactctggatgtgagt
cccgcgatcctagtcccatattacgaccacgactccagtactctcttcctcactggcaag
ggcgaaagcactgtgactacttttgaggttgccacggatgcccctcatttgttcccattg
tccccatacaagcccgctggtcttcaccaaggattcgcttttctgcccaagaacgtttgt
aatgttcgggatgtggaatttgcccgagcttataggctcacgagctcgacaatcgagccg
atctcgttcactgttccgagagtaaaaacggctttctttcaagatgacctgtttcccgat
acaagagtcacttgggagcccaccataagtgctgaggaatggctccagggaagccaaaaa
tcttgctcacgcgtttcactgaaacccgacgacatgcgtaacctttctgaaggctcagga
gtaaccaccaccgtaacacgaacgtctgctcctcaacaaaacaacaacgccatcccgaat
atttcgatgagcggcaacttgaactccttttctcgagaaatgtccaagcaaaaggagcag
gacattgaaaaaagtgtcagcaccatgatgggcgatatggatttgaaattggaacaagac
gacatggaaggtgcagatgagaaggactgggaagaggaggacgatgattga
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