Tigriopus californicus (tidepool copepod): 131877291
Help
Entry
131877291 CDS
T09700
Name
(RefSeq) DDB1- and CUL4-associated factor 5-like
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131877291
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131877291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Phage_H_T_join_2
Motif
Other DBs
NCBI-GeneID:
131877291
NCBI-ProteinID:
XP_059078883
LinkDB
All DBs
Position
3:5727875..5731083
Genome browser
AA seq
706 aa
AA seq
DB search
MAATSRLPLNLVQCLGAREYRGPSSWNDRSYLQKRLDHTSYLFRRDLLGHFGCVNALEFS
KPGHLLASGGDDRRVLLWNINDCLDGTKQTPHNPMDDAHNSNVFCLSFNQDSTKIFSGGN
DEMVLVHDIETKKSLDLFMHDEPVYGVDVNPQNENLFVTACSDGRVQLFDLRQPASEDPL
QIAGYAFSFHSAVFNPQDPRLIATANQKYGLGLWDVRKPGKCVLEYGNPPNRSQTAMSVC
FDGAGRRLLGLRRRLPPVVFNIESPEIVAEFDHPGYYNSCTMKSCSFAGLNDEYIMSGSD
DFNLYLWKLPTKDETWVNRAHLVLRGHRSIVNQVRFNKELGVIASAGVEKVVKMWSTLPF
CSDEDAGVSQSSSFPKNRRLYSRQEYIELVVQGGSDMTHDYSGESIQENKRMIAFFDSLV
QRDVEGLTSSDEDSLTDSARNSGTDSDFEEEEVEEDHSDSDSATQSRTASANSSPTSNSS
ESEEKNSRPTIKRLIALRRKQTMRHYRPKKYRKIDPEHMAKSLSNARSVIVTTSSTEDTS
SDEDFQLKDSGDSPHLCSSSVGSGKSSTSSLLASSSMTSTSSSLSAVAASLVPEALKVSP
PAPSSNKDKVREEILLALQQTDVCDNTPPPDQATEDAIMLAPQALGDDQVTCPTPSASTS
TLFGAHTSTASRESPAVVETNAIKFKSSSKGKARDRGYRNHCRRSE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaactagtcggctgccactgaatctggtccaatgtctgggtgctcgagagtac
cgaggtccaagctcatggaatgatcgctcttatctgcaaaaaaggctggatcatacctct
tacttgttcagacgcgatcttttgggacattttgggtgtgtgaatgccttggaattttcc
aagcccggacatctattggcctcggggggcgacgaccggcgcgttctcctttggaacatc
aacgattgtttggatggaacaaagcaaacccctcataaccccatggacgatgctcacaac
tccaacgtgttctgcttgagctttaatcaagattcgaccaagattttttcaggaggcaat
gatgaaatggttctggtccatgacatcgagaccaagaagtccctggatcttttcatgcac
gacgagccagtgtatggggtggatgttaaccctcaaaacgagaacctcttcgtcacggca
tgctctgacgggcgagttcaactctttgatctgagacagcccgcaagtgaggatcccctt
cagattgctggatatgcctttagcttccattcggctgtctttaatcctcaagaccccaga
ttaattgcaacggccaaccaaaaatatggcctaggtttgtgggatgttcgaaaaccgggc
aaatgcgtacttgagtatggaaatccccccaaccgctcacaaaccgccatgtcggtttgc
ttcgacggagctggtcgacgattgctcgggttgcgacgacgactacccccagtagtcttt
aatattgaatcgccagagatcgttgccgaattcgatcatccgggttattacaatagctgc
accatgaagagttgttctttcgccggacttaatgatgaatatattatgtccggttcagat
gactttaatctatacctttggaaattgcccaccaaagacgaaacgtgggttaaccgagcc
catttggttctccgaggacaccgttcaatagtcaatcaggtcagatttaacaaggagctg
ggcgtcattgcctcggccggagtcgagaaagtggtaaaaatgtggagtaccttgccattt
tgttcggatgaagatgctggagtcagtcaatcctcctcctttccgaaaaatagacggctt
tactccagacaagaatacattgagcttgtggttcaaggcggatccgacatgacccacgac
tactccggagaatccattcaagaaaataagagaatgatcgcttttttcgactcgcttgtt
cagagagatgtagagggcttgacatcctcggatgaagattcgctgacggatagcgctaga
aattctggtacagactcggattttgaagaagaagaggttgaagaggatcactccgattcg
gattcggccacacaaagtcgaacagcctcagccaactcttcaccaacttcaaacagttct
gaaagtgaagagaaaaattcgcgtcccacgattaagaggctcattgctctacgccgcaaa
caaactatgcggcattatcgtccgaagaaatatcgtaaaattgatcccgaacacatggcc
aagagtttgagtaatgctcgatctgtgatagtaaccacttcctcaactgaagacacgagt
agtgacgaggactttcaattgaaagactcgggcgactctcctcatctctgttctagctcg
gttgggagtggcaaatccagcaccagttccctcttagcatcttcgtcgatgacctctacg
agttctagcttatcggctgtagcggcctcacttgttcctgaggccttgaaggtgagccct
ccggctccgtcatcaaacaaagacaaagttcgcgaggaaattcttctcgctttgcaacaa
acggatgtctgtgataacacccccccccctgatcaagccactgaggacgcgattatgttg
gcccctcaagctttaggtgatgatcaagtcacttgtccaactccgtcagcaagtacttca
actctgttcggtgcacacacttccacagcatctcgagaaagcccggctgtggtagagacc
aatgccattaagttcaagtcctcatccaaaggcaaggctcgtgaccgtggctaccgaaat
cactgtagaagaagcgagtga
DBGET
integrated database retrieval system
