Tigriopus californicus (tidepool copepod): 131877410
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Entry
131877410 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131877410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131877410
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131877410
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
HECT type E3
131877410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_EZ
Bfc
Motif
Other DBs
NCBI-GeneID:
131877410
NCBI-ProteinID:
XP_059079039
LinkDB
All DBs
Position
3:4831629..4838873
Genome browser
AA seq
1810 aa
AA seq
DB search
MASNQPDPGGAPPGGDGPADTDGAASGANLAPSTAAGQAGSALDSFLAASSAAASGTAAS
GGSANAAALAAMFSEDLEDSDMGRLQAVLEARGFPPHLAGVLGPRMHHLILNRAMAPSAT
SKAQQLLQGLQATGDESRQLQAVIEMCQLLVMGNEDTLTGFPIRQVVPALIVLLKMEHNF
DLMNHACRALTYMMEALPRSSTVIVDAIPTFLEKLQSIQCMDVAEQSLSALEMLSKKHNK
AILHAKGVMACLMFLDFFSITAQRNALAVTSNCCQGLLPEEFVHVQDALTILSSRLIHDD
KRSSESACLALSRLAESYKNDKHKLRDIAKPEVLSNLQKILVTSPPNVSSNTFVTVLHIL
VIMASNGSEVGPMLLEESIGSTLRQLLVGSSSDHDEFDLVQRNPQELYEITCLIGEMMPP
MPADGIFAVDALLAKPGAFIRDPVLWQWQDDRGNWHTYGFNDCRVIEAAFVAGEDEAGLN
SNGKSFTLNLKSMHEIREENGTARPIQRKLTSQLQNDLETNEKKAQRLKHLSLTSELTKE
LLPVLLEVYSTSAGPGVKQSCIQAFLRMIYHSPSDLLIEVLKVQTVSSQIAGMLSSGDLK
IIVGALQLSELLLQKMPQEFSVHFRREGVLHQVQKLTDPDNPICISNYNESPLSSMGWSS
ASTSVIQGGATGLGGAPSGRSWTVTGSSFASMFPDQLRVPKRRDESSSSPDTPPHPPLRL
SDMLKRKRVSKRSSGRKGRHSEGSLPQDLSGPSTSASTSLPVGGSGGGGAGGAGGAAPVP
APSSGPGGAPDLSFTSSSPPHDGPATPSRRSRLTSSILSQLNPSRWGRSSGNSSNPLLHG
GGHHSESGNSSSSGSSSKRSDASSSAVTINKAVSNPATMAHSREKAKRWVREQASRFLES
YFKESLGSRHPALTILRRLSAQVDHLTRKPKDGERSLREILSVLIENDISPFEVTQSGLV
PSLLTYLTRLELDGHEDITRESRIRCFLHVFLGCPRSLDSDEPPDPDLAPKFLMFVQKMT
ACVNHLEQFPIKMHDMTSGSSGVKSAGSTLRFFKSHHLKCSLQRHPECSSLKSWKGGLVK
IDPLALVQAIERYLITRGYGHPQDKDSGGSDDDMSDDGGTDDMLPSTSRERVDAAIHRLE
FSIGEHVLPYDMTVYQAVQQFGAPVFEISDSDSDNRNSGSSSMYGSPGIWARIHTIYYRP
ASEREDASGVGSSGATGKASIKNSEGGKKGKSSKQSKRKAPDELWNEGVPPERPNPLDAF
MVDKLPKFLNTQDPSLDVLCLLRVVQALNRYWGSLYLTTNYYHPIISPHEFINSKLTAKV
NRQLQDPIIIMTSNLPTWLKEVASVCPFLFPFETRQLLFYVSSFDRDRALLRLLDSVPEL
GASESGQERVTPELDRKKRVISRDNLLKQAEQVINELAHSRSLMEIQYENEVGTGLGPTL
EFYTLVSKEMQRADLNLWKGDTVKISSEDVMEDDENADDCIEYVHSSTGLYPSPLGRNLK
SSHKVKIKNKFQFLGKFIAKAVLDNRMIDLPFSQPFYQWLLKAEQSFTTRDLMNIDPTIA
NTVNQLEGIVRKKRKLEEDDKITPNERLIQIKGLTMDGCPVEDLGLDFTLPGYPNIELRK
GGKHIAVTLDNLHQYVKLVSHWMLIEGVSCQMESIREGFESVFPLESLQMFYPDELDQIF
CGSMQGNFTQWDSKTLGETCKPDHGFNPDSQGIQFLYEVMSAYNREEQREFLQFVTGCPR
LPVGGFKSLSPPLTIVKKTFDSPEVNPDDYLPSVMTCVNYLKIPDYSSKQIMREKLRVAS
QEGQYSFHLS
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaatcagcccgatcccgggggtgctccgcccggcggtgatggaccggctgat
accgatggggcggccagtggtgccaatttggccccatccacggcagctggccaggcgggc
agcgccctagactcgttcttggccgcctccagcgctgcggccagtggcaccgcggccagt
ggcgggtcggccaatgccgcggccttggctgccatgtttagcgaggacctggaagacagc
gatatgggccgcctccaagccgtgctcgaggctagaggctttccgccccatctggcgggt
gttttgggtccgcgcatgcaccacctgatcctcaaccgggccatggcgccctcggccacg
tccaaggcccaacagctcttgcaaggcttgcaagccacgggcgacgagtctcgacagctc
caggccgtgattgagatgtgccaacttttggtcatgggcaacgaggacacgctcaccggt
ttccccattcgccaagtggtgccggccctcatcgtcttgctcaaaatggagcacaacttc
gacctcatgaaccacgcctgtcgagccctaacctatatgatggaagccttgccccggtcg
tccaccgtcatcgtggacgccatcccgacctttttggagaagctccagtccatccagtgc
atggacgtggccgaacagagcttgtcagcgctcgagatgctctccaagaagcacaacaaa
gccattctccacgccaagggcgtcatggcctgcctcatgttcttggactttttcagcatc
acggcccaacggaatgccttggccgtcacgtccaattgctgtcagggtcttctcccggaa
gaattcgtccacgtgcaggatgctctcaccatactctcgtcacgactgattcacgacgac
aagagaagctcggaatccgcttgcttggctttgagtcgcttggccgagagctacaagaac
gacaagcataaactccgcgatattgccaagcccgaggtgttgtccaatctgcagaagata
ttggtcaccagcccgcccaatgtcagctcgaacacgtttgtcactgtcctacacatcctg
gtcattatggcctccaacggctcggaagtcggccccatgctactcgaagagtcaattggc
tcgaccttgagacaactgcttgtggggtcctcttcggatcatgatgagtttgatttggtc
cagaggaatccgcaagagctgtacgagatcacttgtctcattggcgagatgatgcccccc
atgcccgccgatggtatattcgctgtggatgcacttctggccaaacccggtgctttcatt
cgcgatccggtcttatggcaatggcaagatgatcgcgggaactggcacacttatgggttc
aacgattgcagagtgatcgaggctgcctttgtggctggagaggatgaggccggtcttaac
tccaatggcaagtcgttcacgctcaatttgaaatcaatgcatgaaattcgcgaggaaaat
ggaaccgctcgtcccattcaaagaaaattgaccagtcagctccaaaatgacttggagacc
aatgagaagaaagcccaacgattgaaacatttgtccctaacgtctgaattgacgaaagag
cttctgccggtgttactagaggtatactccacgtctgccgggcccggagtgaaacagagt
tgcatccaagcatttctccgaatgatttaccattccccaagcgacttgttgatagaagtc
ctcaaagttcagaccgtttccagtcagatcgcgggaatgctctcctcgggagatctcaag
atcatcgtgggagcccttcaactctccgagttgctcctgcaaaagatgccccaagaattc
agcgtgcatttcagacgcgaaggcgtccttcatcaagtgcaaaaactcaccgaccctgac
aatccgatctgcatttccaactacaatgaaagccccctatcaagtatgggttggtcgtcg
gcctccacttcggtcattcaaggaggcgcaacaggtttaggtggagctccctctggacga
agttggacagtgactggatcctcctttgctagcatgtttccagatcaattgcgggtgccg
aagagacgcgatgagtcttcatcctcacctgatacgccacctcatccacccctccgactg
agcgacatgctcaagcggaaacgagtgtcgaagcgttcttccggacggaaaggtcgccat
tccgaaggatcgctacctcaagacctcagtggtccaagcacctctgctagcaccagcctc
ccagttggtggaagtggagggggaggagcgggaggagcaggaggagcggctcctgtgcca
gcgccttcatcaggacctggaggcgcgcccgatctgtcgttcacatcctcgtcgcccccg
catgatggaccagccactccatcgagacgttctcgtctcacgtcctcgatactttcgcaa
ctaaacccttccagatggggtcgaagttccggcaattcttcgaatccattactccatggt
ggaggtcatcatagcgagagtggcaatagtagcagcagtggatcctcgtctaaacgctca
gatgcctcatcttcggcggtgacgatcaacaaagccgtgagtaatcctgccacgatggca
cacagccgtgaaaaagccaaacgttgggttcgggaacaagcatctcgcttcttagaatcc
tacttcaaagagtctttgggctctcgacaccctgcactgaccatacttcgacgcttgagc
gctcaagtcgatcacttgacgagaaaacccaaagatggagagcggtcattgagagaaata
ttgtcggttctcatcgagaatgatatctctccgttcgaagtcacacagagtggacttgtc
ccgtcactattgacgtatctcacacgattggaattagatgggcatgaggacattacgcgg
gagagccgcatccgatgcttcctccacgtgttcttgggatgtccccggagtttggattct
gatgagccacctgatcccgatctagctcccaaattcttgatgtttgtccaaaagatgact
gcttgtgtgaaccatttagaacaattccccattaaaatgcacgacatgacatcgggatcg
tctggagtgaaatctgccggctcgactctgcgattcttcaagtctcatcatctcaaatgc
agtcttcaacggcatcctgaatgctccagcttgaaatcctggaaaggagggctcgtcaaa
attgaccccttggcgttagttcaagccatcgaaagatatctcattacccgtgggtatggt
cacccgcaagataaggactctggtggatctgatgatgatatgagcgacgatggcggcact
gacgacatgttgcctagcaccagccgtgaacgtgtcgatgccgccatacatcgcctggaa
ttttccattggagaacatgtcctgccctacgatatgactgtctaccaggccgtgcaacaa
tttggagctccggtctttgagatctcagattcggattcggataaccgcaactccggatcg
tcttctatgtatggcagtcctggcatttgggctcgtatccacaccatctactaccgacca
gcttcagagcgagaagatgctagtggtgttggatcctcgggtgccacgggcaaggcgagt
attaagaacagtgaaggtggtaagaagggcaaaagttccaaacagagcaaacgcaaagcg
ccagatgagctttggaatgagggtgtgccgcccgaacgacccaatcctctggacgctttc
atggtggacaagttgcccaaattcttgaacacgcaagacccctctcttgatgttttgtgt
ctactgcgcgtggttcaagctctgaatcgctactggggatccctctacttgaccaccaac
tattatcatcccatcatcagcccgcacgagttcataaactctaaattgacagccaaagtg
aatcgccaacttcaggaccctatcataatcatgacctcgaatcttccaacttggctaaag
gaagtagcgagcgtgtgtccgttcttatttccatttgaaacccggcaattattgttctat
gtgagctctttcgatcgtgatcgcgccctcctacgtctccttgattcggtcccggagtta
ggcgcctctgagagtggccaggagcgtgtcacacccgaactggatcgtaagaaacgggtc
atctctagagacaatctcctcaaacaagccgagcaagtgatcaatgaattggcccattcg
agatctctgatggagatacaatatgagaacgaggtgggaacgggtcttgggccaacgtta
gagttctacaccctggtatccaaagagatgcaacgggcagatttgaatctgtggaaagga
gacactgtcaagattagtagtgaggatgtcatggaagacgatgagaatgccgacgactgc
attgagtacgtccattcatcgacgggtctctacccgagtcccttggggagaaacctaaag
tcctcgcacaaagtgaagatcaagaacaagtttcaattcctcggcaaattcatcgccaaa
gccgttctcgacaatcgaatgatcgatctccctttcagccagcctttctaccaatggctt
ctcaaggccgaacagtctttcactacacgggatctgatgaacatcgacccaaccatcgcc
aacaccgtgaatcagttggaaggcattgtcagaaagaaacgcaaattagaagaggacgat
aagatcacacccaatgagcgactcatccaaatcaagggtctcactatggatgggtgtcct
gtggaagatttgggcttggatttcaccctgcccggatatccgaacattgaattgcgaaaa
ggaggaaagcacattgctgtcactctagataacctacatcaatacgtgaaacttgtgtcc
cactggatgctcatcgaaggtgtgtcctgccagatggagtccattcgcgaagggttcgaa
tcagtgttcccgctcgagtccctgcagatgttctatcccgacgagttggatcaaatcttt
tgtggttccatgcaaggtaactttacccaatgggactccaagacgctcggtgagacatgc
aaacctgatcatggcttcaatcctgattcccaagggattcaattcctgtacgaggtcatg
tctgcctacaatcgtgaagagcaaagagagtttcttcaatttgtgaccggatgtccgcgc
ctgcccgttggcggtttcaaatcactatctccgcctttaacgatcgtcaagaagaccttt
gatagtcctgaagtgaatcctgatgactatttgccgtcagtgatgacttgcgtcaactac
ttgaagatccccgattacagtagtaagcagatcatgagagaaaaactgcgggtggcctct
caggaaggccagtatagttttcacctttcataa
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