Tigriopus californicus (tidepool copepod): 131877470
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Entry
131877470 CDS
T09700
Name
(RefSeq) liprin-alpha-1-like
KO
K26226
liprin-alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131877470
Membrane trafficking [BR:
tcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131877470
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
CENP-H
Metal_resist
Motif
Other DBs
NCBI-GeneID:
131877470
NCBI-ProteinID:
XP_059079131
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All DBs
Position
3:complement(3218973..3233137)
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AA seq
1233 aa
AA seq
DB search
MWNMMCDVMPTISEDSLSQRSSQFGGDDANFEQLMVSMLDERDKLVDSLKNEQEKTSELE
AKLKEVEKERGSLQRQLNQNLPQEFATLTKELNQSREQVLEKDEEITELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAASQSGVSSEVEVLKALKSLFEHHKALDEKVRERLRIA
LEKNSTLEEELEGTRDELNKFKSGQIVVKSGDDGEERENGENGADDANSNSDSNSTSGTA
TTTTTTTTVKKVNGTLDPEVLELRRQIEKHAKDLGQSHRSLSDLRSQKAEMEEKIGQLNK
ELNSAQELIKRLEIDLKENVAQKEDQEERIATLEKRYLNSQREATMLHDLNEKLEQEIKN
KEEQYVLSHDKIKAITEKLDISEQKLIEFASMPDIEEQLKDRMEALTQAQERQGTAEERV
QRLESQLEEKSADVLKLTQRLKMNEEHNQRLSATVDKLLSESNERLQVHLKERMHSLEEK
NHLSNELERTKKKLEDVEQQRVDILKELQRARLEVENVKRQMLQQEIHHNIQQTEALTRN
LSPGNVDMGDGGSSGGTLTRRSVKNSNANTPLDEGWKQGRNFSAHNSNVGNFESFEGDVE
DNDSIFTDVMSPSGHTDAQTLACMLQEQLDAINNEIRLIQEEKMTTEQRAEELESRVGSV
EHMNLLLQSHSQHGSFASSSSHSHHHSGQPLGVPPQPPPRSGRPSAAVQPFEPSSPPMSG
RSTPKASLMSGVHHGHHNEPYMHKYHTLHLSTPSQEINREEAESQRRIMDGSPPTPRSLR
LDRVAQLSVSQEELRRTSMEDSSHSTPSPMSSAASSQDSLHRGAGFNHHTLAGTGQYGYY
QAGNPNVPMSAAAVAAAKKKGVKSTLGRIFGKKDKQLKAMKVAGGAYVTGPIVNSPSGGF
QPMSSNSSTISYHPAYSSGPGPSAMECDIPSSDSMGAGLGGLAGKGDFDRRRKKKHELLD
EAMKAGTPFALWNGPTIVAWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGIS
NPLHRLKLRLAIQEMVSLTSPSAPPTSRTTLAYGDMNHEWIGNTWLPTLGLSQYRTTFME
CLVDARMLDHLTKKDLRTQLKLVDSFHRTSLQYGIKCLKLLNYDRDQLENRRRASEHEIK
DVLVWSNERLIKWVISIGLKDYANNLIESGVHGALIALDEGFDANGIALALQIPTQNTQA
RQLLENEFENLLRQGTSREPGIEPPPSRPALLP
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacatgatgtgcgatgtgatgcccaccatctcggaggactcgctctcgcagcga
tcctcccagtttggcggggacgatgccaatttcgagcaactcatggtgtccatgctggat
gagcgcgataaattggtggactccctgaaaaatgagcaagaaaagacctcggaattggag
gccaaactcaaagaggtcgagaaagagcgaggttcgcttcagcgacaactcaatcaaaat
ttgccgcaggagtttgcaaccctcaccaaagagctgaatcaatcccgagagcaagtcctt
gaaaaggacgaggagatcaccgagctcaaagccgaacgaaacaatacccggctactcttg
gagcatttagagtgccttgtgtctcgacatgagcgatcgcttcggatgacggtcgtgaaa
cgacaagctgcctcacaatccggcgtttcgagtgaagtggaagtgctgaaagccctgaaa
tcgctcttcgagcatcacaaggccttggacgagaaggtccgtgaaaggctgagaatcgct
ttagaaaagaatagcacccttgaagaagagctcgaaggcactcgcgacgagctgaacaag
ttcaagtccggtcagattgtagtcaaatcaggggacgacggggaggagcgagagaatggc
gagaacggagccgacgatgccaatagcaattcagacagcaattccacctcaggaactgcc
accaccaccaccaccaccacgaccgtcaagaaggtcaatggcaccttggaccccgaggtc
ctggagctgcggcgccaaatcgaaaagcacgccaaagatctgggtcaatcccatcggagc
ttgtccgatttgcgatcccagaaggccgagatggaggagaagataggccagctgaacaaa
gagctgaacagtgcgcaagaactgatcaaacgactcgaaattgacctgaaggaaaatgtt
gctcaaaaagaggatcaagaggaacgcatcgccactctcgagaagcgttatctgaacagt
caacgagaggccacgatgctgcacgacttgaacgaaaaactcgagcaggagatcaagaat
aaggaagaacaatacgtgctctctcatgacaagatcaaggccatcaccgagaagctagac
atctccgagcaaaagctcatcgaattcgcctccatgcccgatatcgaggaacagctcaaa
gatcgcatggaggccttgacccaggcccaagagagacaaggcacggccgaggaaagagtc
caaaggttggagagccaattggaggagaagagtgcagacgtgctcaagctcacgcaacgc
ctgaaaatgaacgaggagcacaaccagcgattgtcagctactgtcgataaacttctgtca
gagtccaacgagcgtcttcaagtccatttgaaagagcgaatgcattcactcgaggagaag
aaccacctgagcaatgagcttgagcgaaccaagaagaaattggaggatgttgaacaacaa
agggtggacatccttaaggagcttcagcgtgctcgattggaagtggaaaatgtcaagcga
caaatgctgcagcaagaaatccatcacaacatccagcagaccgaagctctaaccaggaac
ttgtcccccggtaatgtggacatgggtgatggaggcagtagcggcggaaccttaactcgt
cggagcgtcaagaattccaatgccaacacacccctggatgaagggtggaagcaagggagg
aatttctcggcccataacagcaacgtgggcaactttgagtcgttcgaaggcgatgtggag
gataacgatagcattttcaccgatgtcatgtcaccgtctgggcatacggatgctcaaacc
ttggcatgtatgctccaagaacaattagatgccatcaacaatgagatcagactcattcaa
gaagagaagatgacaacggaacagagagccgaggaactagagtctcgtgtgggcagtgta
gagcacatgaatctcctgctccaatctcactcacagcacggctcgttcgccagttcctcg
tcccattcccatcaccacagtggccagcctctgggcgttcctccccagcccccaccacga
agtgggcggccctcggccgcagttcagcccttcgagccctcttcgccgcccatgagtggg
cggagcactcccaaagcgtctctaatgagcggagttcatcatggtcatcataatgagcca
tacatgcacaaatatcatacgcttcacttgtcgacccccagtcaggaaatcaaccgagaa
gaggctgagagccaacgccggatcatggatggaagtccaccaacgccgcgatctctcaga
ctcgatcgagtggctcaactctccgtctcccaagaggaacttcgaagaacctccatggag
gacagttctcactccacaccttctccaatgtcgtctgcggctagtagtcaagattcgctt
caccgtggcgccggattcaatcaccacaccttggccggtacgggtcaatacggctactat
caagcgggcaatcccaacgttccaatgtctgcggctgccgtagcggctgccaaaaagaag
ggtgtcaagtccactctgggtcggatctttggcaagaaggacaagcaattgaaggccatg
aaagtagctggtggagcctatgtcacgggtccgattgtgaactctccctcgggaggcttc
cagcccatgagttcgaactcgtcgaccatttcctatcatccagcctacagtagcggtccg
ggaccatcggccatggagtgtgatatcccatcctcggacagcatgggtgcaggtctggga
ggcttggccggcaaaggcgatttcgaccggcgaaggaagaagaagcatgagctacttgac
gaggccatgaaagcgggaactccttttgccttgtggaacggtcccaccatcgtggcttgg
ctggagctgtgggtgggcatgcctgcgtggtacgtggccgcttgtcgagccaacgtcaag
tctggtgccatcatgtctgcgttgtcggacaccgagatccagagggagatcgggatctcc
aaccctcttcataggctgaagttacgtttggccatccaagaaatggtctcgctgaccagt
ccgtcggccccgcccacctccaggaccactctagcttatggagacatgaaccacgaatgg
attggcaacacgtggctcccaactttaggtctctctcagtatcgcacgacgttcatggag
tgtttggtggatgcacggatgttggaccatctcaccaagaaagatcttcgcacgcaactc
aaattagtggacagcttccaccgaaccagcctccaatacgggatcaagtgtctcaaactt
ctcaactacgatcgcgaccagctggagaatcgccgtcgagcttccgaacacgaaatcaaa
gatgtcctggtgtggtccaatgagcggctcatcaaatgggtcataagcattggtctaaag
gattatgccaacaatctaattgaatctggtgtccatggtgctttgatcgccctggacgag
ggctttgatgccaatggcatcgcactagccctacaaataccgactcaaaatactcaggcc
cggcagttgttggaaaatgaattcgagaatctccttcgtcaaggcacgagtcgtgagccc
ggtattgaaccccctccgtcacgcccagccttgttgccctaa
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