Tigriopus californicus (tidepool copepod): 131877472
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Entry
131877472 CDS
T09700
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131877472
Enzymes [BR:
tcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
131877472
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
131877472
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy_2
Methyltransf_11
Methyltransf_25
2OG-FeII_Oxy
RRM_1
Methyltransf_23
Methyltransf_12
Ubie_methyltran
Methyltransf_31
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
131877472
NCBI-ProteinID:
XP_059079133
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Position
3:complement(3234364..3237079)
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AA seq
615 aa
AA seq
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MSNGRLKSDRKSHRVTRKVEKELGLSILNPGNSETEEGPSPHLLLCNLGLTTHGSEESIL
SLCLPFGAVSNVVLLPQRSFSFVSFEHQSQAWQAFKAIHGQGDHPIYLAFVDKVPDLSHN
PWTHRPWPRGLQILEDVITEEEEQNLLDSFTWNDSADLKNRQVQHFGYEFEYGTNSINGQ
RPIDPPLPQSWLDLLQRVNVGQSLPDQCTVNRYQPGQGIPAHIDTHSCCDGTICSLSLGS
DTVMNFTHPDGIMVPVILSRRSFMVMSDESRYVWSHGIVPRSNDVIPSQTNGLTLKARQI
RVSLTFRKVLAGECQCRFPAQCDSQRDQLIAMDDKLAKSLEDTHVHSVYENIASHFSETR
HKPWPKVIEFLGSLHPGSILVDNGCGNGKYLGLRNDCFKVGSDYSQGLTDICRERGFESL
RSDCLFLPFRSGSADGIICIAVIHHLSTWERRLKAVQEMSRVLRIGGSCLIYAWAQEQAK
DHQPSSYLKKHSVCDPPHGVASTNPTMAVCDTHLPLVLPVHKNRTNFQHKDLLVPWKVKQ
QQQRRQQQPPQFEGSSTTSSDAIDGDDGGGETFHRFYHVFVEGELEKLVSHVAGVSVEKS
YYDQGNWCVVFRRLS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatggtaggcttaaaagcgatcgaaaatcccaccgagtgacgagaaaagtggaa
aaagagttgggcctgagtatcctcaatcccggcaattcggaaacggaagagggtcccagt
ccgcatttgttactctgcaacttaggattgaccacccatggttcggaggaatccatcttg
agcctttgtttgccctttggtgctgtgtccaatgtggttttactacctcaaaggtcgttc
tcctttgtcagtttcgagcaccaaagccaggcctggcaggcatttaaagccatccatggc
caaggcgaccatcccatctacttggcctttgttgataaggtcccggatctgagccataat
ccatggacccatcgaccttggcctcgaggtctccaaatcttggaagatgtgataaccgaa
gaagaagagcaaaatctgctcgattctttcacttggaacgattcggctgatttgaagaat
cggcaagttcaacactttggctatgaatttgagtacggcaccaatagtatcaatggccaa
cgacctattgatccacccctgccccaatcgtggttggatttacttcaaagagtcaatgtt
ggacagtcactgcccgaccagtgtaccgttaatcgttatcaacccggtcaaggaattccg
gcccatatcgatacgcatagttgttgtgatggaaccatttgctccttgtccttgggatcg
gataccgtcatgaacttcactcatccagatgggatcatggtgcccgtgatcttaagcaga
aggtcgttcatggtcatgtcggatgagtcgagatatgtctggagccatgggatagtgcca
aggtccaatgacgtgatccccagtcagaccaatggactgacactcaaagcccgccagatt
cgagtctctctgacgtttcgaaaagtgttggcgggtgaatgtcaatgtcggttcccggct
caatgtgattctcagcgtgatcaactcatagcaatggacgacaaactggccaaaagtttg
gaagatacccacgtgcattccgtttatgagaacattgcctcacacttcagcgagacgagg
cacaaaccttggcccaaggtcatagagttcttggggtccctccatcccggatcgattttg
gtagacaacgggtgcggcaatggcaaatacttgggtctgagaaacgattgcttcaaggtt
ggaagtgactacagtcaaggtttgactgacatttgtcgggagcgtgggttcgagtccttg
cgaagcgattgcctgtttctaccgttcagatccgggtccgccgatggtatcatttgcatc
gccgtcatccaccatttatccacttgggaacggcggctcaaagccgtgcaagagatgagc
cgcgttttacgcatcggcggctcttgtttaatctatgcttgggctcaagagcaagccaag
gatcaccagccctcatcctatttgaagaagcattccgtctgcgacccccctcacggggtg
gcgagcactaaccccaccatggccgtgtgtgacacccatttacccctcgtgctcccagtt
cacaaaaacaggaccaattttcaacacaaagacctgcttgttccctggaaagtgaaacaa
caacaacaacgacgacagcaacagccaccacagttcgagggttcctcgacgacctcgtcc
gatgccatcgatggggacgatgggggaggagagacattccatcgattttatcatgtgttc
gttgaaggagaacttgagaagctcgtctcgcatgtggcaggggtttcggtggaaaagtca
tattatgatcaggggaactggtgcgtggttttccgaaggctttcgtga
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