Tigriopus californicus (tidepool copepod): 131877490
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Entry
131877490 CDS
T09700
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131877490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131877490
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131877490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
APP_E2
Motif
Other DBs
NCBI-GeneID:
131877490
NCBI-ProteinID:
XP_059079155
LinkDB
All DBs
Position
3:12739891..12742821
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AA seq
286 aa
AA seq
DB search
MASPSSSDSSLSSSAPPSPLRSTPSGGPPLKRSLSPAGPGRPKKEKLSSPPPASVQDSQP
EEGQIVSEDDDDDQAEPETEDDELRELKPSLPPRGSPTGSAPDSPPDTKPDDLVLPASGP
SSQTQSEDQDPPNKERPSPTPKEESDKGNHHISHPESTPEPEKVKKTKEELEEEEREKMQ
VLVSNFTEEQLDRYEMYRRAAFPKAAIKRIMQTITGNSIGQNVVISMAGITKVFVGEVIE
EALDYMESLGEQGPLKPKHLREAVRRMRVEDKLPLGEKKKSVNMSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaccttcgtcgtccgattcgtccttgtcgtcctcggccccgccctcgcctttg
cgctccaccccaagcgggggtccgccccttaagcgttcattgtcgcccgctgggccgggc
cggcccaaaaaggagaagttgtcgtcgccgccgccagcctcggtccaggattctcagccg
gaagaaggtcaaattgtgagtgaggatgatgatgatgatcaggctgaaccagagactgaa
gacgacgaattgcgcgagctcaaaccctccttaccgcctcgaggctcgcccacgggctca
gccccggattctcccccagacacaaaacccgatgatctcgtgttacccgcgagtggaccc
tcatcacaaactcagtcggaagaccaagacccacccaacaaggaacgcccgagtccaacg
cccaaggaagaatccgataaagggaaccaccatattagtcaccccgaatccaccccggaa
ccagagaaggtgaagaaaacaaaagaggaactagaagaagaggaacgcgagaagatgcaa
gttttagtatcgaattttacggaagagcaattagaccgttacgagatgtaccgacgagca
gccttccccaaggccgcaatcaaacgaatcatgcaaacaatcacgggcaattccatcggc
cagaatgtggtgatttcaatggccggcattaccaaagtgtttgtaggtgaggtgattgaa
gaggccctggattacatggagagcctgggcgagcaagggcctctcaagcccaagcatttg
cgagaagccgttcgccgcatgcgggtggaagataagttacccttgggcgagaagaagaaa
tcggtgaacatgtccgcttaa
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