Tigriopus californicus (tidepool copepod): 131877495
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Entry
131877495 CDS
T09700
Name
(RefSeq) sodium-dependent proline transporter-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131877495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131877495
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131877495
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
131877495
NCBI-ProteinID:
XP_059079161
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Position
3:7285339..7290230
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AA seq
694 aa
AA seq
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MTDEKNKKGDGSIEPMEYQDDENQERGNWTGKLDFLLSCLGYAVGLGNVWRFPYLCYKHG
GGAFLIPYTIMLIFIGVPCFFMEISIGQFAALGPVTIYSNMAPLFKGLGFANFMASSFVG
IYYNMIIAWTIYYLFASFTSHLPWSDCNNEFNSEFCFSITDYKNCLELRDNSTENSDAIY
HMGRCLSNDDDLAKIRDNLTHFYGCTFEEKFYNNPLDKTDGVNYTLPKPGIYLNSTDCVE
AGRENEIQSLFDIPNSKRRTAAQEYFQKSVLVQSNGIEEMGSIQWHLALCLLAAWIVIFC
CLIKGIKSSGKVVYFTATFPYFVLFILLGRALFLEGAIDGIRFYIIPDFDRLSDISVWSA
AAVQIFFSLSVAGGGLITLASYNPFHNNVVRDTVIVCLGNCLTSFIAGFAIFSVLGFLAH
ELGVDVQDVVQDGTGLAFIAYPDLVTRIVGAPFWSFLFFAMLFTLGLDSQFAIVETILTG
ILDFAPQWRGKKTLIVGIVCIVGFFCGLPLTCEGGGYVLDFLDFYAAGWPYLFIGLTELI
LVCYVYGIENFMDDLYNICGFNPGLWCKTIFMFVYLIISPLLILVILIVDWSQYTPLTKD
EYVYPWAANAFGFVIAFISILAVPIVAVYLYGSTLFENSKNHQMSDALKRTNAELLRPTA
EWRKNADRAKRQDARNGNNESGFEGRDNPGLVTD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgaaaaaaacaaaaaaggagatgggtctatcgagcccatggaatatcaggac
gacgaaaaccaagagcgaggaaactggacggggaaattggattttctgttgtcttgtttg
ggctacgccgttggtttgggaaacgtatggcgatttccatatttgtgttacaagcatggc
ggaggagcgtttttgattccctacacaatcatgctcattttcattggggtcccctgcttc
ttcatggaaatcagcattggtcaattcgcagccttggggccggtgaccatctattcgaac
atggcaccattgtttaagggtttgggatttgccaatttcatggccagctcctttgtgggt
atctattataacatgatcatcgcttggaccatctattacctgtttgcttcgttcacctca
catttgccctggtcggattgtaacaatgagttcaactcagagttttgcttcagtatcacg
gattacaagaactgcttagagttgcgtgacaactcgacggagaattccgatgctatttat
catatgggcagatgcttgtccaatgacgatgatttggctaagattcgagacaatctcaca
catttttatggatgtacctttgaggagaagttctacaacaacccactagacaagaccgat
ggggtgaactacaccctccccaaacctggaatctatctcaactccactgattgcgtcgag
gccggtcgggagaatgaaatccaatcgctctttgatattcccaacagcaagagacgaacc
gctgcacaagaatactttcaaaaaagcgttctagtccaatccaatggcatcgaggaaatg
ggatcgattcaatggcatttggccttgtgcctgctggctgcctggatcgtgatcttttgt
tgtttgatcaaggggatcaagagctcaggcaaagtagtttacttcactgccacgtttccc
tactttgtactcttcatactcctgggtcgggctttattccttgaaggagcaatagatggg
atccgattttacatcattccggattttgaccgtctcagcgacatttcggtatggtctgcg
gctgcggtccaaatcttcttttccttatctgtagctggaggaggtctgatcactttggct
tcctacaacccgttccataataacgtggttagagacaccgtcatcgtgtgtctaggaaat
tgtctcacctcgtttattgccggatttgccattttctccgtgttgggatttttggctcat
gagctgggtgtggatgtgcaagatgtggttcaggatggaacaggactggccttcatcgct
tatccagatctagtgacaagaatcgttggagcgcctttttggtccttcttgttctttgcc
atgcttttcacactggggttggattcgcaatttgccatcgtggaaacgattcttactggc
atactggattttgctcctcaatggcgaggcaaaaagacgttgatagtgggcattgtgtgc
attgtcggattcttctgtgggcttccacttacttgtgagggtggaggatacgtattggat
ttccttgatttctacgccgctggatggccatacctcttcattgggttgactgaattgatc
ttggtgtgctacgtttatggcatcgaaaactttatggacgatctctataatatttgtggc
ttcaatccgggactatggtgcaaaaccattttcatgtttgtttacttaatcatttcgccg
cttcttattctggtgatactaatcgtggattggtctcagtacactccgcttacaaaagat
gaatacgtatacccttgggcggccaatgcttttgggtttgtgattgccttcatcagtatc
ttggccgttcccattgtagccgtctatttgtatggctccacgttgttcgagaattccaaa
aatcatcaaatgtccgacgccctgaaaagaacaaatgcggaactattaaggcccacggcg
gaatggcgaaagaatgctgaccgagctaaaagacaagatgcacggaatggtaataatgaa
agtggatttgaaggtcgagacaatcccgggttagtgactgactga
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