Tigriopus californicus (tidepool copepod): 131877505
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Entry
131877505 CDS
T09700
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131877505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131877505
Spliceosome [BR:
tcf03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
131877505
Complex B
131877505
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
Fz_Smo_sans_CRD_N
Motif
Other DBs
NCBI-GeneID:
131877505
NCBI-ProteinID:
XP_059079175
LinkDB
All DBs
Position
3:complement(13538064..13541493)
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AA seq
350 aa
AA seq
DB search
MTQFLPPNLLALFAPREPIRYLPPPDKLPHEKKNVHTYHGVAQFIAGNFEDPKDTPAPIK
AENREERLARKKREKEEQVAYKLEQEIALWDPTSVPSATADPFKTLFVGRINYYTTESKI
RREFETFGPIKSIHMVTDPEKDKPRGYCFIEFEHERDMHSAYKKADGMKIDGRRVLVDVE
RARTVKGWLPRRLGGGLGGTRRGGADVNVRHSGREDGPRHRSRSRERGGGGGGERRSRSR
DKERHRRRQSRSRSRKRSRRSRSRGERGERDRDRRRTKSRDRKRSRRSRSRSRGERRDRR
ERDRRRDGGDLNIKDEPDAFGYDEYGVQVKQEEEDRKPDLGYQGYGENYQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttccttccgcccaacttattggccttgttcgcgcctcgtgaaccgattcgc
tatctgcctccaccggataaattgccccacgaaaagaagaatgttcacacgtatcatggt
gtggctcagttcatcgccggaaactttgaagaccccaaagacacgcccgcccccatcaag
gccgagaaccgagaagagaggttagcccgcaaaaagcgcgagaaagaggagcaagtggcc
tacaaattggagcaagagattgccttgtgggaccccacttcagttccgagtgccacggct
gatcccttcaagactttattcgtgggacggatcaattactacaccacggaatccaaaatt
cgccgcgagtttgaaacttttgggcccatcaagtcgatccacatggtgactgatcccgaa
aaggacaaacccaggggttattgctttattgagtttgagcatgagagggacatgcactcc
gcctacaagaaagctgatggaatgaagattgacggtagacgcgttctggttgatgtcgag
cgggccagaacagttaaaggatggctgcccaggcgattaggtggtggtctgggtggaaca
cggagagggggagctgacgttaatgtccgtcattccggtcgcgaggatggacctcgtcac
cgttcccgctcaagggagcgtggtggtggtggtggcggtgaaaggcgctctcgctcaagg
gataaggagcgccatcgtcgtcgtcaatccagaagtcggtcgcgtaagcgctcgcgccgg
tcacgctcgcgtggtgaacgcggtgagcgtgatcgcgaccgccggcgtacaaaatcgcgt
gatcgcaagcgctcgagaaggtcgagatcgcgctcccgcggagagcggcgtgatcgacgt
gagcgtgatcgcagacgtgatggtggtgacctcaatattaaggacgaaccagatgccttt
ggctatgatgaatatggtgtgcaagttaagcaagaggaagaggacaggaaaccagatctt
ggctatcagggatacggagagaattaccaatga
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