Tigriopus californicus (tidepool copepod): 131877534
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Entry
131877534 CDS
T09700
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131877534
04082 Neuroactive ligand signaling
131877534
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131877534
Ion channels [BR:
tcf04040
]
Ligand-gated channels
GABA-A
131877534
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GFIT
Motif
Pfam:
Neur_chan_LBD
DUF998
STIMATE
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
131877534
NCBI-ProteinID:
XP_059079210
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All DBs
Position
3:2322816..2324917
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AA seq
370 aa
AA seq
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MKAHFSPTFLVLLGLLSLGLSERIKVSETLDRLLADYDPRVRPNYQVEPLTVNVSLYVLD
MPKISSRDKEYTLMMFFRQFWKDERLAYADGSLQENIVASSGYSEKIWVPDTFFVNERKA
TFHHIPSPNEFIRIEPDGRILRSVRISVTLTCNMDMSGFPFDSQTCSMEMESYGAQMKDI
KYDWQALDISSHIHSEDFAIIGFKNVTEEAHLSTGSYSRLVMKIFFERKSGYYVTVFMIP
VAMLTILAMMSMWMDRDNIIARLGLILVGIMGVMCSSTIVQVLHPASETKAIDVYFGISV
TMIFFVALEAVIVTKKGGKTQSGSYIESIARLAMITAFVLFQVVIFIYAMVLKMGYPDGS
EDMVLFVPNK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacatttctccccaacctttcttgtcttactcggtctactgagtttgggcctg
agtgaaagaataaaggtttccgagacgttggacagactcctggcagactatgatcctaga
gtgaggcccaattatcaagtggagcctttgacagtcaatgtgagcctttatgttctggat
atgcccaaaatttcgtccagggacaaggagtacaccttgatgatgttcttccgacaattt
tggaaggacgaacgattggcctacgccgatggctcccttcaagaaaatattgtggctagc
tctggatacagtgaaaaaatctgggtgcctgataccttctttgtgaacgagaggaaagcc
acttttcatcacatcccaagtccaaatgaattcatcagaattgagcctgatggtaggatc
ctcagaagtgtacggatcagtgtgaccttaacatgcaatatggacatgagtggttttccg
ttcgattctcaaacatgttctatggaaatggagagttatggagcccaaatgaaggacatc
aaatacgattggcaagccttggacatttcatcgcatatccattccgaggactttgctatt
attggtttcaagaatgtgactgaggaagcgcatctttccacggggagttattctcggctg
gtcatgaaaattttctttgagaggaaatctggttattacgtaacagtctttatgatacct
gtggcaatgttgactatcttggcaatgatgtcaatgtggatggatcgggataacatcatt
gcacggctgggcctaattctcgtgggtatcatgggagtcatgtgcagctccaccatcgtt
caagtccttcatccagcctccgaaacaaaagccatcgatgtttacttcggtatttcagtc
actatgatcttctttgtggccctagaagccgttattgtcacgaaaaaagggggaaagact
caatctggaagctatattgaaagcattgctcgtttagcaatgattactgcctttgtgcta
tttcaagtagtaatcttcatatacgctatggttttgaaaatgggataccctgatggttct
gaagacatggtcttatttgttccaaataaataa
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