Tigriopus californicus (tidepool copepod): 131877540
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Entry
131877540 CDS
T09700
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131877540
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
131877540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
MobC_2
Motif
Other DBs
NCBI-GeneID:
131877540
NCBI-ProteinID:
XP_059079219
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Position
3:4614261..4619256
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AA seq
937 aa
AA seq
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MGDSDDDGDYKRRDKFRSERRSYNDDRGGGGGGGGASPPGRPGGWREARPGPPGGGGGYG
GGGGGGYGGGRRGYDGGGGGGGGYRRDRYSPSRRHHHEMSPPAKRMRGGHDWDDGGGGGY
RHDRGHDDYDRGHRGYRGGGGGGGRPGGGGGGVGAESQHQDDSVQPPMMSFKAYLATQDD
SITDDEAIKKYADYKLEFKRQQLNEFFVNHKDEEWFKLKYHPEDAVKRKEEQKSALMKRV
DVFKDFWDQKKFNGVSIDGDQGDHLIKLLDSIVIMLEGGTEHDLKILDQEAEAAALALKN
EEIKPTEDAKPGGASTETKVEKEEGEKSNGEEKSNVIDEQLELQKKAKEYLEAKGGEESS
EKPAKSRKRKRTKEFDDGSSIGSSEDEDEEDEEEPPPGMDKKPEVNDEKDQAKSEEGSEK
KNGDEEMKEEGEAEVKKESEDVKEEANKTEKDEDMEEGESEPKPRPLHKTASIFLRNLAP
TITKQEVEAMCKKYPGFLRAAIADPQPDRRWFRRGWVTFERSVKIKEICFNLNNIRLRDC
ELGPIVNRDLTRRIRTVNGITVDRKIVRNDIKLAAKVVTNLDKRWNLWQNEKSGQKNGAA
EDLNGSAEEAIGLGSSNPVLENITDYLIEEASAEEEELLGKNNDLEDGEEGEEGNSIVRD
EELIKVLDRLLFYLRIVHSVDFYNHSEYPNEDEMPNRCGIMHARGIPPSSNVTQNEIEDY
SVTFEKKMGSFLQPRADLTEDEASKLGMKNEEDEVEKFILANTQELGKDKWLCPLSGKKF
KAADFVRKHIFNKHCEKIEEVKKEVQYYNNYLKDPKRPQLPENPQNKGGGSGRRDGPPPG
SRGGPQVGDPYNYSGFPREATNYPVYDRPDRGYNEPRYGGDRGYRGRRPEPYGGRGRIRD
RVGGPPGGVRHDNYGPPGGGRPIITYRDLDAPRDDDF
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcgatgacgatggcgattacaaacgccgcgacaaattccgttccgaacgg
cggagttacaacgatgatcgcgggggcggcgggggtggtggcggtgctagtccgcccgga
cgacccggtggttggcgagaagcccgcccaggtccgccggggggagggggaggctatggc
gggggaggcggtggcggttatggtggaggtcgacggggttatgacgggggcggaggcggt
ggcggtggctatcgccgtgaccgctattccccctcgcgacgtcatcaccacgagatgtcg
ccaccggctaaacgaatgagaggcggccatgattgggatgatggcggtggcggtggatat
cgacacgaccgaggtcatgatgattatgaccggggtcaccggggctatcgaggcgggggt
ggcggcggtggacggcctgggggcggcggaggcggggttggcgccgagagccaacatcag
gatgatagcgtccagccgcccatgatgtcgttcaaggcgtacttggccacgcaagatgat
tcgatcacggacgatgaggccatcaagaagtatgcggactacaagctggagttcaagcgg
cagcaactcaacgagttcttcgtcaatcataaggatgaggaatggtttaaattgaaatac
caccccgaggatgccgtgaaacggaaggaggaacaaaaatccgccttgatgaagcgggtg
gatgtgttcaaagatttctgggatcagaagaagttcaatggagtcagtattgacggcgat
caaggagaccacttgatcaaacttctggactccattgtgatcatgttggaaggaggcact
gaacatgacctcaagatcttggatcaagaagccgaggctgctgcattagccttgaaaaat
gaggagatcaagcccaccgaagacgccaaacctgggggtgcctcgactgagacgaaggtc
gagaaagaagagggagaaaagagcaacggcgaagagaaatccaacgtcatcgatgaacaa
ctcgagctccagaagaaagccaaagagtatttggaggccaaaggtggcgaagagagctct
gagaaacctgccaaaagtcgtaagcgcaagcgcacgaaagagttcgatgacgggtcctcc
attggaagctccgaggacgaagacgaggaagacgaagaggagcctcctccaggtatggac
aagaaacctgaagtaaatgacgaaaaagatcaagccaaaagtgaggaaggcagcgaaaaa
aagaacggcgatgaggaaatgaaagaagagggagaggccgaggtcaaaaaggaatccgag
gacgtaaaggaagaagcgaacaagaccgagaaagacgaagatatggaggagggagagagc
gaacccaaaccacgaccattacacaagacggcctcgatcttcctccgaaatctggctcca
accatcacgaagcaagaagtggaagccatgtgcaagaagtatcccggcttcttgagagct
gctattgccgatcctcagcctgatcgtcgctggttccgcagagggtgggtcacttttgag
aggagcgtcaagattaaagagatctgcttcaatttgaataacatccgactaagggactgc
gaattggggccaatcgtcaatcgcgatttgaccaggcgaattcgaaccgtcaatgggatc
acggtcgaccgtaagatcgtgcggaacgacatcaaattggccgccaaagtggtcaccaat
ttggacaagcgatggaatctgtggcaaaacgagaagagcggtcaaaagaacggggccgct
gaggacctgaatgggtcagccgaagaggccattggtcttggctcttccaatcccgtactg
gaaaacatcaccgactatctaattgaagaggcctcggctgaggaagaggagctcttgggc
aagaacaacgatcttgaagatggagaggaaggcgaggaaggcaacagtattgtccgtgac
gaggaactcatcaaggtcttggatcgattgcttttctacttgcgcattgtccattccgtg
gacttttacaaccactcggaataccccaacgaggatgagatgcccaatcgatgcggcatc
atgcacgctcgtggaatcccaccctccagtaacgtgactcagaacgagatcgaagactat
tccgtgactttcgagaagaagatgggaagttttcttcaacctcgagccgacctgaccgag
gatgaggcctccaaattgggcatgaaaaacgaagaggacgaggtagagaagttcatcctg
gccaacacgcaagagttgggcaaggacaaatggctctgtcccttgtcggggaagaagttc
aaggccgccgatttcgttcgcaagcatatcttcaacaagcactgcgagaagatcgaggag
gtcaagaaggaggtccaatactacaacaactacttgaaagatccgaagcgtccgcaatta
ccagagaacccgcagaataagggcggcggatcgggtcgtcgagatggacctcctccgggt
agccgaggtggaccccaagtgggagatccgtacaactacagtggattcccaagagaagct
actaattatcccgtttacgaccgacccgatcgaggctataacgagccccgttacggagga
gaccgcggatatcgtggccgacgacctgaaccttacggagggcgtggcagaattcgggat
agggttggaggtcctcctggtggcgttagacacgacaattacggaccccccggaggtgga
agacccatcatcacctatcgcgatttagatgcgcccagggacgacgacttttga
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