Tigriopus californicus (tidepool copepod): 131877606
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Entry
131877606 CDS
T09700
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131877606
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
131877606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
131877606
NCBI-ProteinID:
XP_059079305
LinkDB
All DBs
Position
3:8700608..8707798
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AA seq
2166 aa
AA seq
DB search
MPVRLESEAKRSLRPVGMRAGSAPNLAGGLPGSSSSGGPALGGVPGFASPHGSALSSGMA
GVIGRGPGGGLGPPDVYPQDPNQKEDELTAVHVKQGFTQGYATLVSEEYSSAICGGRHSN
FLQAMSSTKVLADLKAIAAKKEEQNTLSDSGKKRQTLNTRDFWLVTQKNKPGADNWFNDL
RGGKPLSALAKCVPVFNKKEELLPALIEKKVPFNRAVWFFKMTSGYALAMSEINKPKKRQ
LMDPSIEWTQALVRFLKEQLVEISTMLQSSSSSSTNIGMGMVDEFKPENAQCYKYWTYLT
QLCEVMFHQGLLDRQDFLTWVVDCVEKCRGPNDPIIRLVLPVVLQYTKDIVKSELLSRRL
AYQCAKKITYLVNDTEALNNLSTLTAQDNGGAPPVITAFMELVNDPDTRFIILGMSSVVQ
TIALECPSALVWNYFGENKSPSYLMGSPLDHLPNCTPSGLPMMPPGSGTQAARLRIKQAE
MLIRERSIACEVKWSEDFAQSPSRDVNAILSILEELDSFVLFDKIDTSSHFIDVLYNRIF
PTHNDNPIPDMTIVHSLCHWAVTSQRSGEHRAFVVAMLLDKRQALLSPDVEDDREDDEET
YYSSEPPVFQAHLFQYLDHDAPTITEDRQEFSNLVLLFFELICHDVFSHDYYLCQLISRG
DLSQTTSTESRDEKNEDGDGSFEDSKINDDLANLLNQIKEGNQLEGPYSPPPPPPPKSLA
VKGDLDIARRCRHWQYCYHFPLPSNESSVHDANQRHVLLYGTGKGKDEVSKNVKRLSKDI
TKLFSKKFSIDVSEGGKVKKHTKNESSYKDVVTSFQSLSYYDQHAVTHQCGQTVVEMIIA
FAHTQANYLPVTEYVSFLMDLTGLALNIQEILDWSMQILKELPSVELQLHERRSTLTRNY
TSSLALCLVGVLRRYHSVLMLNPSDVAFIFDQLSKIAPLSKLTNGDGPGDKKGFDCTSAE
WCILAYMYDLSTICPTLKSKEKIHELKRQFSPQTDASESSLTLTDRRFGIDYVLNPKKHV
DPLTIKNLIESPQHQYNLVCNVLMEVCECTDQEKLNDIATLCCEFTSQCYSLSSEWLGAF
AALCNSGNNTGYIDLVNQVYKSDTPIDKQLGVFAAILIARHCFHLQAFVINVAIPSLLQA
WEEVKEKSLTKETERGARLSCQLLLKLFESVDIYQPTIHFNSNQSTSSCHSKQAAHPSGI
YSSCDRHLLSSAHRNMTVGAIIAVLKGILVLGDAEEDKSSDNNKKYGDGDYRSLGLSGMR
GSRMENASLSQFARYTLKQISQQDWVHDRCRQTPEQTLLKNGILLDPMLSPKQAQKLLRL
ICYPAEYPNTELNLSDPQEPKMIVSKILHNLDEWNLRISAIEIRLMYHQLSSNGNNASDL
NRWLENSANAIVESFDFGAQSKKDLDMKPTEGSKTSPRKSHLASGRSKIRKHCFIWMVPY
LVKYLKFLQSRVLKVSTTVLEETNWSRATKHHSKDSNEGTRFCYQPFLHLVLTCIRELDA
DSKDKKDKSDKEEQKEHLLHALHGQLSTYLCFNKNEKIYQYDDPMSRKTMLDSLRLRFSL
VGGMFDSICRNVNFTQEWSTLLVQLMSRGVVSLANNSELFTVALDMLATLIHSTMVYDKD
ASVSERSDEGRKHHAYHTLVKKLKKEIGENHCASMKILRQLLPFPKVVIEALVCEPFGNV
TDGKGNRVKGLNCDKKQGMQVADKQKMNPWDMLDGHRNPAPLSWAWFGALKHERKPLKCE
ENFFELKFAKDSFEHTKTYYLDPPPLPDEDLEPPPKENKNPTDKANMPVPNMGPGPHPNG
MRMGNMMNRPMMNMAGYPFPRGRMDPSFMNPGARMNNPRMMGPTGGMVHNQMNPGMNYQN
PGNNAMMGNNGNWDTMNRMNTNNPPNNFMPNQNFNAGGPMPMNNPGAGVGGGAGMAGVSQ
AAPGGVVGGGGGMMNSHRFQGPSNGNSKQVLQMMIRARHNPTGHFSQYNNQAAPTPPQQP
NMGNQFFQPRQGGFSMRGSNPRMHHQGNAMFPGQVNNTGNAMSMGGGSVHPQQPPAYGQN
NMTQYNNFGNQMGNMNNQFMMRQSQNPGSMYANTSGNMMGRSGMINQPQQGNGFSVRGQF
MPNQGMVGGNAYRQAVPPNNQGMGMRMPQQPQHGMQNPQMMAQMQRGGGNQANNPQMNYQ
QQNRFQ
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcgtctcgagagcgaggccaagcggtctttgcggccggtgggaatgcgggca
ggatctgcacctaaccttgccggaggattgccgggttcctcctcttctggaggaccggct
ttgggcggtgtaccgggttttgcctcgccccacggatcggctctgtctagtggaatggcc
ggtgtgataggacggggaccggggggaggtttgggcccgcctgatgtttacccacaagat
cccaatcagaaagaggacgaattgacagccgtgcatgtgaagcaaggctttacccaaggt
tatgccaccttggtgagcgaggagtattcgtcggccatttgcggcgggcgccacagcaat
ttcttgcaggccatgtcttcgaccaaggtcttggccgatttgaaggccatagccgctaaa
aaagaggaacagaatacgttgagtgactcgggcaaaaagcgacagactttgaacacccgg
gatttttggctcgtaactcaaaagaacaaaccgggtgcggacaattggttcaatgatttg
cgtggggggaaacctctgtctgcgttggccaaatgtgtgcccgtgttcaataagaaagaa
gagctcttgcccgccttgattgaaaagaaagtgcccttcaatcgggctgtgtggttcttc
aaaatgacttcgggctatgccctggccatgtccgagattaataaaccgaagaagcgccag
ctcatggacccgagcattgaatggacccaagccttggtccggttcctaaaagagcaactt
gtagagatctcaacaatgctccaatcgagctcaagttcgtccactaacattggaatggga
atggtggacgaattcaagccggaaaatgcccaatgctacaagtattggacttacttgacc
caattgtgcgaggtcatgtttcatcagggtctcttagatcgacaagattttttgacttgg
gtcgtggattgtgtagaaaaatgtcgaggtcccaatgatcccatcatacgattggtcttg
cccgttgtgcttcagtacacaaaagatatcgtcaagtctgaactgctaagtcgtaggttg
gcataccaatgtgccaagaaaatcacctaccttgtcaatgacacggaggccttaaacaac
ttgtccacactcactgctcaagataatgggggtgctccacccgtgatcacagccttcatg
gaattggtcaatgatccagacacccggttcatcatcttgggcatgtcatccgtggtccaa
acgattgctttagaatgcccttccgctttagtttggaactactttggcgagaacaaatcg
ccctcgtatctcatgggttctcctctcgatcatttacccaattgcacaccctcaggccta
cctatgatgccccctggctctggcacgcaagcagcacggctacgaattaaacaagccgaa
atgctgataagagaacgatctatcgcatgtgaagttaagtggtccgaagattttgcccag
tcgccctctcgagatgtgaacgcaatcctctccatcctcgaagagctcgatagctttgta
ttgtttgacaagattgatacgtcctcccatttcatcgacgttctctataatcggatcttt
cccactcacaacgacaatccaatcccggacatgaccatagttcattcgctttgtcattgg
gccgtgacctctcaaaggtccggtgaacatcgcgccttcgtcgtggcaatgttgctggac
aagcggcaagccttgttatcaccagacgtagaagatgaccgggaagacgatgaggagacc
tactattcctctgagcctcccgtgttccaggctcatctttttcaatacctggatcatgac
gctcccaccatcacagaggatcgccaagagttctcaaacttagtactcttgttcttcgag
ctcatctgtcacgatgttttctctcacgattattacctttgtcaactaatctccagagga
gacctcagccagacaacttcaacggagtcaagggacgaaaagaacgaagatggcgatgga
tcattcgaagacagtaagatcaatgatgacctggctaaccttctcaatcaaatcaaggag
ggcaatcaattagaaggtccatactccccgccgcccccgccgccccctaaatctctagcc
gtgaaaggtgatctagatatcgcacggcgttgtcgtcattggcagtactgttaccatttt
ccacttccaagtaatgaatcatcagtccacgatgccaatcaaagacacgttttgctctac
ggcactgggaagggcaaggatgaggtttccaagaatgtgaaacgcctatccaaagatatc
accaaacttttcagcaagaagttcagtattgatgtgtcagagggtggaaaagtgaagaag
cacaccaagaacgaatcgtcgtacaaagatgtggtaacgagttttcagagcttgtcctac
tacgaccaacatgcggtcacccatcaatgcggccaaactgtggtagaaatgatcattgca
tttgcccacactcaggccaactacttacccgtgactgagtatgtctcgttcctcatggac
ttgaccgggttggccctgaacattcaagagatcctagattggagcatgcagatcttgaag
gaactcccaagtgttgagctgcaactccatgaaagacggtccactttgactcgaaactac
acgtcgtccttagctttgtgcttggtgggcgttttgcgacgctatcattcagtactaatg
ttgaacccaagtgatgtggccttcatttttgatcagctatcaaaaatcgctccgttaagt
aaactcacaaacggcgatggacccggagacaagaagggatttgattgcacctccgctgaa
tggtgcattttagcttatatgtatgacttatctacaatctgtccaaccctgaagtccaag
gagaagattcacgagctcaaacgacagttctcgcctcaaactgacgcttctgagtcgtcc
ctgaccctcactgaccgtcgttttggaatcgattatgtcctgaatcctaagaaacatgta
gatcctctgacgatcaagaacctcatcgagagtcctcagcatcagtacaacttggtgtgt
aatgtcttaatggaagtgtgtgagtgtacggatcaagaaaaactcaacgatatcgctaca
ttgtgttgtgaattcacctcgcaatgctattccctctcatcggaatggttgggtgctttt
gccgctctttgcaactccgggaacaacaccggctatattgatttggtcaatcaggtgtat
aagtcggatacgcccatcgacaaacaactgggcgtgtttgcagctatcctcattgcacgg
cattgttttcatctgcaggcttttgtcatcaacgtcgccattccctctctccttcaagct
tgggaagaggtcaaggagaaatccctaaccaaagagacggaaagaggagccagattgagt
tgtcaattgctcttgaaactctttgaatccgtcgatatctatcagcccaccattcatttc
aactcgaaccagagtacctcttcatgccactccaagcaagcagcacatccttcagggatt
tacagtagctgcgaccgacatttattgtcctctgcccatcgaaacatgacagtgggggcg
attattgctgttctcaaaggcatcctcgtcctcggagatgccgaggaagacaaaagcagt
gacaacaacaaaaagtacggtgatggggattatcgtagtctgggactctctgggatgcga
ggaagccggatggagaatgccagcttatctcagttcgccagatatactctcaaacagatc
agccaacaagattgggtgcacgatcgttgtcgacagactccggagcagactttgctgaag
aatggcattctcttggatcccatgttgagtccaaagcaagcccagaagcttctcagactg
atctgttacccagcagagtatcccaacacggagttgaatttgtcagacccgcaagagccg
aagatgatcgtatctaagatcttgcacaacctcgatgagtggaaccttcgaatctcagcc
atcgaaattcgcctcatgtatcatcaactgtcctctaatggaaataatgcgtcagatctg
aaccgatggctcgaaaactccgctaacgccatcgtggaatcctttgattttggagcccag
tcaaagaaggacttggatatgaaaccaaccgagggctccaagacctctcctcgcaaatct
catcttgctagtggccggtcaaaaattcgaaagcattgctttatttggatggtcccctat
ctagtgaagtacctgaaatttttgcagagccgagtccttaaagtcagcaccacagttctg
gaggagacgaattggtcccgtgccaccaaacatcactcgaaagatagcaatgagggtaca
agattctgctaccagccttttcttcacctggtacttacttgcattcgagagttggatgcc
gacagcaaggacaagaaagacaaatctgacaaggaagaacagaaagaacatttgcttcat
gctcttcatggacagctttccacttacttgtgtttcaacaagaacgagaagatctatcag
tatgacgacccgatgtccaggaagaccatgctagactccttacgactgaggttcagtcta
gtaggcgggatgttcgacagcatttgtaggaacgtcaactttactcaagaatggagtact
cttctcgttcaactcatgtcacgaggtgtggtgtcattggcaaacaattcggaactcttc
acagtggctctggatatgctggccactctgatccattccacaatggtttatgacaaggat
gccagcgtatctgagcgatcagatgaaggccggaaacaccatgcctatcatacgttggtg
aagaaactgaaaaaagagattggagagaaccattgcgcaagcatgaagatcctgcgtcaa
cttcttcctttcccgaaagtggttatagaagccttggtttgcgagccatttggcaacgtg
acagatggaaaaggaaatcgtgtcaaaggcctgaattgtgacaaaaaacagggaatgcaa
gtggccgataagcagaagatgaatccttgggacatgctcgatggtcaccggaatcctgca
cctctttcatgggcctggtttggtgctctcaagcacgagcgcaaaccattgaaatgcgaa
gagaacttcttcgaactcaaattcgctaaggacagtttcgagcataccaaaacctattac
cttgacccacctccccttcctgatgaagatttggagccccctccaaaagagaacaagaat
ccaacggataaggccaatatgcccgtgcctaatatgggccccggccctcaccccaatggc
atgcgaatgggcaatatgatgaatcgtcccatgatgaacatggccggatatccgttccct
cgaggccgaatggatcccagttttatgaaccccggtgccaggatgaataacccacgcatg
atgggacccacgggcggaatggtacataaccaaatgaatccaggcatgaactatcaaaac
cccggcaacaacgccatgatgggcaacaatggcaattgggacaccatgaaccgtatgaac
accaataaccctccaaacaatttcatgcccaaccagaacttcaatgctggggggccaatg
ccgatgaacaatcctggagcaggagttggcggcggagccggcatggcaggagtcagtcaa
gctgctccgggtggtgtagttggaggagggggcggtatgatgaactcgcaccgattccaa
gggccttccaatgggaattcaaagcaagttcttcagatgatgatccgcgcccgccacaac
cctaccggtcattttagccagtataacaatcaagcagcccccacaccgcctcaacagccc
aacatgggcaaccagttcttccaaccccgtcagggtggcttttctatgcgcggttccaac
ccccgtatgcatcatcaaggtaacgccatgttcccgggacaagtgaacaatacgggcaat
gcgatgagcatgggcggggggtcggtgcatcctcaacaaccccccgcatatggtcagaat
aatatgacgcagtacaacaattttggcaatcaaatgggcaacatgaacaaccaattcatg
atgcggcaaagccagaacccgggttccatgtatgccaatacgtctggcaatatgatgggc
cgcagtgggatgatcaatcaaccgcaacagggcaacgggttttcggtcagaggccaattc
atgcccaatcaaggcatggtgggtgggaatgcctaccgacaagccgttccccccaataac
caaggaatggggatgcggatgccacaacagcctcaacatgggatgcagaatccgcaaatg
atggcccaaatgcaacgcggcggcgggaatcaagccaacaaccctcaaatgaattaccag
caacaaaaccggtttcaataa
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integrated database retrieval system
