Tigriopus californicus (tidepool copepod): 131877607
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Entry
131877607 CDS
T09700
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like
KO
K09662
N-acetylglucosaminyltransferase 3, mucin type [EC:2.4.1.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00512
Mucin type O-glycan biosynthesis
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
131877607
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131877607
Glycosyltransferases [BR:
tcf01003
]
Glycan extension
O-Glycan
131877607
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Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
131877607
NCBI-ProteinID:
XP_059079306
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Position
3:complement(6090251..>6093873)
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AA seq
518 aa
AA seq
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MSLPLYRMCLWPLKRGRKLLAFALVYLAVSILYFFVIGWSDSSALETFPLDNQNFLQRDL
DARDTLVNALSLVSCSNSQSFNNDTLRRQFRQYLTESAIINRTRNCNSYFKIIQTLAFED
ITPEERDYPIAYGHLINGQVGTFELYLAVHFRPWDTHCIHVDPKANEATHQAIEGLVRCY
REKFKGTSFFIAKHPVPVIWQDESVLRADLICLQQSIHKNEHWKMYLNLASSELPLMSHQ
EFRKQLAQANTNVIDVGPNENSERQTRLMGIRRGGPDETNLEREWMGENPYAPPCNIMIM
KGYKNAALTREFASFVLNHRVSLEYFNWLKNTECPDEHYYSTLATLEVESEVNQTQDKPH
KLTLKQNLKDDGPFSDKTCYRKFEWIGGWAQKKSEEPDGPEEDRTVFLDRCNLVEDTCQD
VKYIYSPPSAPDDEVHNWLGHNWLGQVCLRKSLWYYPECKGRQIRRMCHFGVEDLDLVRK
GNCLFGNKFNINVDVAAIMCQIKELRTKANEVDPSLSH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcccttgtatcgcatgtgcttgtggcctttgaagagaggacggaaattgcta
gcatttgcgctagtgtacctggcggtttcaatactctattttttcgtgattggttggtcg
gattcgtccgctctggaaacgttccccttagataaccagaatttcctccaacgggacctg
gacgccagagacactttagtcaatgctctctcgcttgtgagttgttccaatagtcagtct
tttaacaatgacactttgaggcgacagtttcggcaatatctaactgagtcggccatcatt
aatcgaactcgcaattgtaattcctacttcaaaatcatccaaaccctggcctttgaggat
atcactcccgaggaacgggactatccgattgcttatggccatctcatcaacggacaagtg
ggcacgttcgagctgtacctcgcggtccactttcgtccctgggacacccactgcattcat
gtggaccccaaggccaacgaagccacgcatcaggccattgagggcttagtccgttgttac
agggagaagttcaaaggcacctcgttcttcatcgccaagcaccctgtgccggtgatttgg
caagacgaatccgtgctacgagccgacttgatctgcctgcagcaatccatacacaagaat
gagcattggaagatgtatttgaacttggcctcgtccgagttgcctttgatgtcgcaccaa
gagtttcgcaagcaactggcccaggccaatactaatgtgatcgatgtagggcccaacgag
aactcggagcggcaaactcgactcatggggatcagaagaggtggtccggatgaaaccaac
cttgagcgggagtggatgggcgagaacccgtacgctccaccctgcaatatcatgatcatg
aaaggctacaagaatgcagcactcaccagagagtttgcctccttcgttttgaaccatcgg
gtctctttggaatatttcaattggttgaagaacacggagtgtccagatgagcactattac
tccactttggccactttagaagtggagagtgaggtcaaccaaacccaggacaagccccat
aaactcacgttgaaacagaatcttaaagacgatggaccattcagcgacaaaacctgttat
cgcaagttcgaatggatcggtggatgggcgcagaagaaatccgaggaacccgatggtccc
gaagaagatcgaaccgtgtttttggaccgttgtaacttggtggaggacacctgtcaagac
gtcaaatacatttactcacctccctcggctcccgatgatgaggttcataattggctaggg
cacaattggttggggcaagtgtgtcttcgaaagagcctttggtattatccggagtgcaaa
ggtcggcaaatccgccggatgtgccattttggcgtcgaagacttagacctggttcgcaag
ggaaactgtctctttggcaataagttcaatatcaatgtggatgtagcggccatcatgtgt
caaatcaaggagctccgaaccaaagccaacgaggtcgatccgtctcttagtcattga
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