Tigriopus californicus (tidepool copepod): 131877610
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Entry
131877610 CDS
T09700
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131877610
04082 Neuroactive ligand signaling
131877610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131877610
Ion channels [BR:
tcf04040
]
Ligand-gated channels
GABA-A
131877610
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
131877610
NCBI-ProteinID:
XP_059079310
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Position
3:2281115..2311623
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AA seq
581 aa
AA seq
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MIGPSFERVAKMSLGMGRIHDIFFVKMLFLVTVLALFFGNTLKLNAVAEGTHSAFADVNI
SALLNSFQEGYDKRVRPNYGGIAVTVGVSLYVLSISRLSEVEMDFTLDMYFRQFWRDPRL
SFDRGIGLEKLVVGAEYIKMIWVPDTFFVNEKKAYFHDATTDNQFLRILHTGAILRSIRL
TITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLNSVQISADVSLPQFKVLG
HRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGATPAR
VSLGVTTVLTMTTLMASTNAALPKISYVKSIDVYLGACFFMVFASLLEYASVGYMAKRIQ
MRKNRFLALQKMAEQKKNEAMNPGGPGLNDGGPPDHNGIPKQTEIRINMHDLNRSMPVGS
SSSVRFSNNKGILVNSPRQVSHHHHPLNQHITSALSPITPVTTYQGHVPMAVFNNPQMQQ
DYNEYLLPPDHPRHPSNQGGHHQGVVHNPKILQSLTPKQIRDLECKKNLHKMLGIAPSDI
DKYSRIFFPISFISFNLMYWIIYLHVSDEVAEDLVLLHPDE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgataggaccctcgttcgaaagagtagcgaagatgtcgttggggatgggacgaatccat
gacatctttttcgtgaaaatgctattcctcgtcacggttctggcactcttctttggaaac
acactcaagctcaacgctgtggctgaagggactcacagcgcgtttgctgatgtgaacata
tctgctctactgaactcctttcaagagggttacgacaaaagggtccgacccaactatgga
ggaattgctgtaaccgttggagtatctttgtatgtgctctcaatatccagactctcagag
gtcgaaatggatttcaccctggacatgtacttccggcagttttggcgcgacccaaggctg
tcctttgaccgtggaatcggccttgaaaagctggttgtcggggcagagtacataaagatg
atttgggtgcccgacaccttttttgtgaatgagaaaaaagcgtactttcatgatgccacc
actgacaaccagtttttgagaatcttgcacacaggggccattttgagaagcattagattg
accatcaccgcttcttgtcccatggaccttcagtactttccaatggataggcaattgtgt
tacatcgaaatcgaaagttttggatatacgatgagtgatattcgatacaagtggaatgat
gggttgaattcggtgcagatctcagctgacgtgtcactcccacaattcaaggttttaggg
cacaggcaaaaaactatcgaggccagtctttcgacaggcaattactctcggttggcttgc
gaaatccagttcgtccgttctatgggctactatttgatccagatttacatcccatccagc
ctgatcgtgatcatttcctgggtgtctttctggctgaatcggggtgccacgcccgctcga
gtcagtctgggtgtgaccactgtgctgaccatgaccaccctgatggcctccaccaatgcc
gctcttccaaagatctcttatgtgaaatccattgacgtgtaccttggcgcctgtttcttc
atggtgtttgcttctctgttggagtacgccagcgtaggttacatggccaagcggatccaa
atgcgcaagaaccgcttcctggctctgcaaaaaatggccgagcagaagaaaaatgaagcc
atgaatccgggcggacctggcttgaacgatggtggccctccggatcataatggtatcccc
aagcaaacggagattcgcataaatatgcacgacttgaacagatccatgcccgtggggtct
tcgtcgtctgtacgcttttccaacaataaaggcatccttgtcaactcgccaagacaggtt
agccaccatcatcatcccctgaatcagcacataacctcggccttgagtcccatcacgccg
gtgactacttatcagggtcacgtgcccatggctgtgttcaacaacccgcagatgcaacag
gactacaatgaataccttctccctcctgaccaccctcgacatccttccaatcaaggaggt
caccaccagggcgtggtgcacaatccgaagattctccaatccctcacacccaaacagatc
cgggacttggagtgcaaaaagaacttgcacaagatgttgggcatcgctccatcggacatt
gacaagtattcccggatcttctttcccatctctttcatctcctttaacctgatgtattgg
attatctaccttcacgttagcgatgaggtggccgaggatctggttcttcttcatccggat
gaatag
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