Tigriopus californicus (tidepool copepod): 131877653
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Entry
131877653 CDS
T09700
Name
(RefSeq) sterol regulatory element-binding protein 1-like isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131877653
04131 Membrane trafficking [BR:
tcf04131
]
131877653
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
131877653
Membrane trafficking [BR:
tcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
131877653
Autophagy
Mitophagy
Other mitophagy associated proteins
131877653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
131877653
NCBI-ProteinID:
XP_059079379
LinkDB
All DBs
Position
3:complement(7437416..7445558)
Genome browser
AA seq
1005 aa
AA seq
DB search
MAAEDFSIEEFLTSTNGDSIFDGSHPDDPSSLLTDDTFMSVLDDNVNLDIFNAAVEDLAH
QAFNTETPVATLPPETKSAPSLQPTYFSRVQSISSPTISSGSSPSVPSPGSPVSPGQVVP
QEALTLTAPLAPPSTGYESPTIRSLLQPQPSIQPTRPAQLAELSGGQKIILQPIVPSTKI
LVQTQTGGQPMFLQTTGTGAQTFLTTAGADGTSTLIYRPIESNLAVATAPTTSTSASTQY
LSTENAGSKMAFTLAPGPTAAQLDQIQPDIMPMETSFPKKPERRSAHNIIEKRYRSSIND
KIIELKNMVAGEDSKMNKSLILKKAIDYIRFLQNQNIKLKQENLRLMAVKHEPIPSPSSS
ISLPDSPMSLKSEHSGMHDKSRMVLCMFLLGLFVINPFSSMVAPGFDYVSNTGTPGRTML
SFESQYSWKQLFQLSASTLLLTTIYVGLFLLGMIRIFIYGEAYVPDNSSSKNKYWVHRKQ
TDIALTGGRAKKDEINRHLRLAVEALGRPVPTGQLELILATLWQCIHQLLHRLGVARWFV
NRAGGFIIDDLKRKQFAGARKEAALAYHQLHQVHLATEERDHLMGVFLGMTAVNLTESSV
ANLPSNFRCHVYALMSLRIKHSLPRFFGFWARFFMFKAKRRQCKNEEIDANLNWMLGQDG
QSFVAKGKWYFGLKCSELTEDVDSLNPLAMIGRYFRDYQLQRALMIAVSPGQATGRTVDC
LEAVRLAEENNSAVDMRVLKPVQDATSRWWASVLATAAHWMLDEKDNATLLYQNVESCPK
DDSLLYDCIVACFDAQRLSQTSSCTAYQLMAAMDQATHNLEKAADQLLSQNTSSDFQVDR
NGLLLASDWLTDARVALWEQKLASEPVAKGFLCSIQRDLNSLRKIAHNQDWLASKISLRE
ATVRMMAGAAPGRTQQLLDQSLMQKAASKSIICGKDDRTPQLGEREHATALFLACRHLPT
QLISMPGERAGMLTEAAKTLDKIGDKKRGQECYKLMKKLGTSVQA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaagacttttccatcgaggagttcctcacttccaccaacggcgactcgatt
ttcgatggctcccaccctgacgacccgtcctccttgctcacggacgacactttcatgtcc
gtgctggatgacaatgttaaccttgacatcttcaatgcggccgtggaggatctggcccat
caggccttcaacaccgaaacgcccgtggccactttgccgcccgagaccaagtcggccccc
tcgctccagcccacctatttttctcgggtgcagtccattagttcgcccaccatttcgtcg
gggtcgtccccgagcgtccccagtcccggctcgcccgtctcgcccggacaggttgtgccc
caagaggccttgacactcaccgctccgctggcaccgcccagcacgggttacgaaagtccg
accattcgcagtctgcttcagcctcaaccctctattcaaccgacccgtcccgctcaatta
gctgagttgagcggcggccaaaagataattctgcaacctattgtgccctcgaccaagatc
ttggtgcaaactcagacgggtggacagcccatgttccttcagaccactggcacgggggcg
caaacgtttcttaccacggctggcgccgatggcacgtcgacgttaatctatcgcccgata
gaatcaaacttagccgtcgccaccgcccccaccacctcgacctcggcctcgactcagtac
ttatccacggaaaatgccgggtcaaaaatggccttcaccctagccccgggtccgaccgcg
gctcagttggatcaaattcagcccgacataatgcccatggagacctcgtttcccaagaag
cccgaacgacgctctgctcacaatatcattgaaaaacgttatcgctcttcgattaatgac
aaaatcatcgagttaaagaacatggttgctggtgaagactccaagatgaacaaatcattg
atcctcaagaaggccatcgactacatcagattcttgcaaaatcagaacatcaaacttaaa
caagaaaatctccgactaatggcagtcaaacacgaaccaattcccagtccatcttcgtcc
atttccttgccggactcgccaatgtctctgaaaagcgagcactctggcatgcacgacaag
tcgaggatggttctctgtatgtttctattggggttgtttgtcatcaatccgttttctagt
atggtggctcctggctttgattatgtgtcaaacacgggaactcctggacggacgatgctc
agttttgagtcccagtattcgtggaagcagttatttcagttgtctgcttcaaccttactt
ctgaccaccatctacgttggactcttcctcttgggcatgatcaggattttcatctatggc
gaggcctacgttccggacaattcatcctcaaagaacaagtactgggtgcaccgcaaacaa
acggatatcgctttgactggaggtcgagcgaaaaaagacgagattaaccggcatttgaga
ttggctgtggaggccctcggacgaccagtacccacgggtcaacttgaacttattttggca
actctctggcaatgcattcaccaactgttgcatcgtttgggcgtggcccgatggttcgtt
aatcgcgcgggtggttttatcatcgacgacttgaaacggaaacagtttgccggggccagg
aaggaggccgctttggcttatcaccaacttcatcaagttcatttggccacggaagaacgg
gatcatttgatgggcgtgttcttgggaatgaccgcagtaaacctaacagaatcatcggtc
gccaatttaccgagcaactttagatgtcatgtgtatgcgttgatgtctcttcgcatcaag
catagcttaccccgattctttggtttctgggcccgtttcttcatgttcaaagccaaaaga
cggcagtgcaaaaatgaggaaatcgatgccaatctgaattggatgttggggcaggatggt
caaagcttcgtggccaaaggcaaatggtattttggattgaaatgttcagagcttaccgaa
gatgtggattctttgaaccccttggcaatgattgggcgttatttccgcgactaccaactt
caacgagccctcatgatcgctgtatcgcccggacaagccacgggtcgaactgttgattgt
ttagaagccgtgcgattggctgaggagaataattccgccgtggatatgagggttctgaag
cccgtgcaagatgccacctccagatggtgggcttcagtattggctactgctgcccattgg
atgttggacgagaaagacaatgcgactttactatatcaaaacgtggagtcatgtccgaaa
gacgatagtctgctgtatgattgtattgtggcttgtttcgacgctcaaaggttgtcacaa
acctcgtcgtgtaccgcttatcaactcatggctgccatggatcaagctacacataacctg
gaaaaggccgctgatcaattgctttcccagaataccagctccgatttccaagttgaccgg
aatggattgttgttagccagtgactggttaacggatgcgcgcgtggctctttgggagcag
aaactcgcatccgaaccagtggccaagggattcctttgctcgattcaacgggatttgaac
tcgttgaggaagatcgcccacaatcaagattggttagcctcgaaaatcagtctacgagag
gccactgtgagaatgatggccggggccgccccgggtcgaactcaacagctccttgatcaa
tcgttgatgcaaaaggcggccagcaagagcatcatttgcggaaaagatgatcgtacgcct
caactcggtgaacgcgagcatgccacagctttgttcttggcctgtcgtcatttgcccact
caactgatctcgatgcccggggaaagagccggtatgctgacggaagcagccaaaactttg
gacaaaattggtgacaagaagcgtggtcaggaatgctacaaacttatgaagaaattgggc
acttcagtacaagcttaa
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