Tigriopus californicus (tidepool copepod): 131877708
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Entry
131877708 CDS
T09700
Name
(RefSeq) transient receptor potential-gamma protein-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131877708
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
131877708
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
ASA5
Motif
Other DBs
NCBI-GeneID:
131877708
NCBI-ProteinID:
XP_059079444
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All DBs
Position
3:complement(8924929..8972761)
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AA seq
1265 aa
AA seq
DB search
MEPSLIEGGLSPSRSYPTSRLLPDHERRPDQAGGEMLSPSSNIMDEMNNSEEISSKSSSG
PKAPKTVRIMDSMKKQTIKSNKSSKIKSQSIHGMTDEDKSTRPYREIMPLSRNERLYLVA
VERGDVATVRRMLANTNDDLLNIDCCDPLGRSALLMAIDNENLEMVELLLENKVETKDAL
LHSINEEFVEAVEVLLDYEHRYRAGEVPSWEAIPVDTATFTPDITPLVLAAHRDNYEIIK
ILLDRGFVLAVPHDVRCGCEECMTSRQDDSLRHSRSRINAYRALASPSLIALSSKDPILT
AFQLSWTLRRLSFAEHEFKSEYLELRNQCQQFATSLLDHTRSSYELEILLNHDPTGPLYQ
HGERMHLNRLKLAIKFRQKKFVAHPNVQQLLASIWYEGLPGFRQKNMILQGLEVCRIGLL
FPFFSLAYIICPWMSFSQKLRKPFIKFICTSASYFTFLFLLILASQRIEVFIAEWFQNEM
LKQWLSNDVTTKRGSTPTLVEWCILAWVGGLIWSEIKQLWDVGLREYVNDMWNVIDFVTN
SLYVATIALRLVAYYKVQEELRAGSKSAHLPREHWDTWDPMLISEGLFAAANIFSNLKLV
YIFSVNPYLRPLQVSLSRMVMDILKFISLFVLVLFAFSCGANQLLWYYADLEKQRCYNEQ
QTIKEASEGVTFANGSFTTINPQPGVIQHDINHCLAWRRFANLWETSQTLFWAIFGLIDL
DNFELTGIKEFTRFSGLLMFGSFSVINIIVLLNLLIAMMNHSYQLISVSSEKADVEWKFA
RSKLWISYFEEGGTVPPPFNIIPTPKSLFYLFKWAFTKICGRASKMKKEHLKTKKVRQAS
ERDFKYQAIMKNLVRRYVTQEQRKAENEGVTEDDVNEIKNDISAFRFEFIDIMRQTGHKV
ESITGLHGGMGRKDRLKTRRILKGVGVASDIGGVGSASFSADLSISASNTLPKRTSLTVP
NDGSNSAEIANDNAALRRSPIAKFAYRLAGGHRSGETSLSSSFRSKNRGRHGSRWSAQSS
DDSHESNQAQIHEEPSKDLLGNTVKHQGSRREKFSKARSPIQCLNPLQLQAPGSVSRAAG
LNATEDIELGDTSSCRGIRDQIGEETENDEDDDDDDMEGNETPIRDPSTSVGGYYKKGGL
AGIHRMFQVDLNDTLDDMSRHESVPLISSDSAQDPWASKKPNKSTCSLLLDSAPNFAGGC
DLGSSSTKEGGTKAQNGGASSGGGPVSASSGTSTSSNAIASSGPMSKTMMPGLKPSAKNS
NSGWL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatctttgatcgagggtggtctaagcccaagccgatcctacccgacatcacga
ttattgcccgaccatgagagacgaccagaccaagccggtggcgaaatgctctctccttcc
agcaacatcatggacgagatgaacaattccgaggagatctcttccaagtcgtcgagtggt
cccaaggctcctaagaccgttcggataatggactccatgaagaaacaaaccatcaaatcc
aacaaatcatccaagattaagagtcagagtattcatggcatgactgatgaggacaagtca
acccgcccctatcgagaaatcatgcccctgagtcgcaatgagcgattgtaccttgtggcc
gtggagaggggagatgtggccactgtacggaggatgttggcaaacaccaacgatgatttg
ctcaatatcgactgctgtgatcccctcggccgttccgctctcctcatggccatcgacaac
gagaacctggaaatggtggagctcctcctcgagaataaggttgagacgaaagacgccctc
ttacactctattaacgaggagtttgttgaagctgttgaagtgcttttggattacgagcat
aggtaccgagctggcgaagttccgagctgggaggccattcccgtggacacggcgactttc
acgccggatatcactccattagttttggcggcacatcgagataactacgagatcatcaag
attctcttagatcgaggattcgtcctcgccgtccctcatgatgtcagatgtggatgtgaa
gaatgcatgacctcccgccaggatgacagtcttcgccattcacgctccaggatcaatgcc
tatcgggccctggccagtccctccctcatcgcgctttcaagcaaggatcccattctcaca
gcctttcagctcagttggacccttcgacggctctcgtttgcagagcacgagttcaaaagc
gaatatctggaacttcgcaaccaatgtcagcagttcgccacgtccttgttggatcacact
cgatcctcgtacgagttggaaattctcctcaaccacgatcccacgggaccactctatcag
cacggggaacgaatgcacctcaaccgcctgaaactagcaatcaaattccgacagaagaag
tttgtggcacatccgaacgtccagcagctcttggcgtccatttggtacgaagggttaccc
gggtttcgtcagaagaatatgatccttcaaggcctggaagtgtgtcggattggcttactt
tttccatttttctctctcgcctacatcatttgtccgtggatgagcttctcacagaagttg
cggaagcctttcatcaagttcatttgcacttcagcttcctattttacgtttctttttttg
ttgatcttggcctcgcaaaggatcgaagtgttcatcgccgaatggtttcagaatgagatg
ctcaagcaatggctttccaacgatgtcacaacaaaacgagggtccactccaactctagtg
gaatggtgtattttagcttgggtcggaggcctaatttggagcgagatcaagcaactatgg
gatgtgggtctgagagagtatgtcaatgatatgtggaacgtgatagacttcgtgaccaac
tcattatacgtggccacaatcgccctgagattggtggcgtattacaaggtccaagaggaa
ttgcgcgctgggagtaaatctgctcatcttccccgcgaacattgggacacgtgggatccc
atgctcatctcagaggggctctttgccgccgccaacattttttccaatctcaaactggtg
tatattttctccgtcaatccttacttgagaccactccaagtctcgttgagccggatggtc
atggacatcttgaagttcatctcacttttcgtcctggtcttgtttgccttctcgtgtggt
gctaatcaattgctttggtattatgcggatctggagaagcaacgttgctacaatgagcaa
cagaccatcaaagaggccagcgaaggagtcaccttcgccaacggaagctttaccacaatc
aatcctcagccaggggtcattcaacatgatataaaccattgtttggcttggaggagattt
gccaacctttgggaaacctctcagaccttgttttgggccatttttggcttgattgatttg
gacaacttcgaattgactgggatcaaagagttcactcgtttctccggacttttgatgttt
ggctccttctccgtgatcaatatcatcgttctgctcaatctgctcattgccatgatgaac
cactcctaccaactcatctctgtcagctcggaaaaagctgatgtcgaatggaagtttgcc
cgaagcaagttgtggatctcctattttgaggaaggtgggaccgttccacccccgttcaac
atcattccaacgcccaaaagcttgttctatttgttcaaatgggctttcacgaaaatctgt
ggtcgagccagcaagatgaagaaagaacatttaaagacgaaaaaagtgcgccaggccagt
gagagagatttcaaataccaagccattatgaagaacctcgtccgccgttatgtgacacaa
gagcaaaggaaggctgagaatgagggcgtcacggaggatgacgttaacgagatcaaaaac
gacatctccgccttccgcttcgaattcatcgacatcatgaggcaaactggtcacaaagtg
gaatccattacgggtttacacggtggaatgggccgcaaagatcgattgaaaaccaggcgg
atcctaaaaggagtgggcgtagcctccgatattggcggcgtgggatctgcctcattctcg
gcggatttgtccatctcagcttcaaacactcttcccaagagaacatcattgaccgtgcca
aatgacgggagcaattcggccgagatagccaatgacaatgcagctctacgaagatccccc
atcgccaaattcgcctaccgattggcgggcggccatcgaagtggagagactagtttaagt
tccagcttccgatccaaaaaccgaggtcgacatggatctagatggtcggcccagtcaagc
gatgactcgcatgagtccaatcaagctcaaatccatgaagaaccctccaaagacctcttg
gggaacactgtcaaacatcaggggtcccgacgagaaaagttttccaaggccagaagtcct
attcaatgcctgaatccgttacaattacaggctccggggagcgtcagccgggcggcgggg
ctgaatgcaaccgaggacattgaattaggcgatacctcgtcatgccgggggataagggat
caaattggggaagaaacggaaaacgatgaagacgatgatgatgacgatatggagggtaat
gaaactccgattcgggatccgtccacgtccgttggcgggtattataaaaagggcggtctg
gctgggattcatcggatgtttcaagtggacctgaacgacaccttggatgacatgtcccga
cacgagtccgtgcccttgatctcttccgattccgcccaagacccgtgggcctccaaaaag
cctaataaatctacctgtagtctccttctggattcagcgcccaattttgccggaggatgc
gatcttggatcgagtagcacaaaagaaggggggaccaaagcacaaaatggtggagcctcc
tccgggggcgggccggtttcggccagttccgggacgagtacttctagcaatgccatcgca
tcatcggggccaatgtcaaagacaatgatgccaggcttgaagcccagtgccaagaattcg
aattcgggatggctttag
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